G61760


Basic Information

Item Value
gene id G61760
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3936684 ~ 3937790 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83350
CTATGAGGAACGTTTAGACAACGTTAGTAAATGGTTGTGGAAACGCTCCCTTGTTTGCTGGGTTCATTTCTTGAGTGAAGAAATGGCTACACATTGTTAGTGGCATGTTGGACATTCTGGTTATAAATTCTGGAGATTTCTCACCTTCAGCTGAGACTTGGACACTTTCCCACTGCGCTCGACGTCTAGAGAGGTGAAGGCGTACCAGATGGACTTCAGGAGCTCTGCCTTTAGATCCATGCTCCCATGCTGAAGTGAAAacactgtgtatgtgtgagtgtgtgtgtgtgtgtgctctactGAAAGCCAGTGGTGAATAAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83350 True 323 lncRNA 0.46 2 3936684 3937790

Neighbor

gene id symbol gene type direction distance location
LOC103029416 LOC108438794 coding downstream 6081 3919017 ~ 3930603 (-)
LOC103029733 LOC108438795 coding downstream 21055 3900201 ~ 3915629 (-)
LOC103036181 LOC108438810,LOC108279896 coding downstream 47044 3868738 ~ 3889640 (-)
LOC103036484 NA coding downstream 70948 3855542 ~ 3865736 (-)
LOC103030485 NA coding downstream 98182 3834332 ~ 3838502 (-)
wnt7b wnt7b,wnt7ba,LOC103028473,LOC107695867,LOC107725526,LOC107732964 coding upstream 31056 3968846 ~ 3990482 (-)
LOC103027117 LOC103027117,LOC108438787 coding upstream 163175 4100965 ~ 4114368 (-)
phyh phyh,LOC107743808 coding upstream 178948 4116738 ~ 4121756 (-)
LOC111192866 NA coding upstream 187000 4124790 ~ 4127308 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding upstream 380650 4318440 ~ 4334012 (-)
G61746 NA non-coding downstream 81723 3788102 ~ 3854961 (-)
G61754 NA non-coding downstream 85568 3847028 ~ 3851116 (-)
G61670 rap1b,LOC106576640,LOC107695907 non-coding downstream 294167 3562771 ~ 3642517 (-)
G61630 NA non-coding downstream 420869 3512201 ~ 3515815 (-)
G61611 NA non-coding downstream 537914 3398558 ~ 3398770 (-)
G61785 NA non-coding upstream 71647 4009437 ~ 4009943 (-)
G61818 NA non-coding upstream 72998 4010788 ~ 4013340 (-)
G61833 ppara non-coding upstream 135979 4073769 ~ 4075972 (-)
G61837 NA non-coding upstream 145934 4083724 ~ 4099381 (-)
G61851 NA non-coding upstream 192549 4130339 ~ 4130964 (-)
cdpf1 cdpf1,LOC107695897 other downstream 90215 3840601 ~ 3846469 (-)
G61676 NA other downstream 278416 3650845 ~ 3658268 (-)
mdm1 NA other downstream 387982 3529520 ~ 3548702 (-)
G61587 NA other downstream 621445 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 1402331 2464834 ~ 2534353 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 397328 4335118 ~ 4426156 (-)
G61942 NA other upstream 684423 4622213 ~ 4622577 (-)
G62377 NA other upstream 2436679 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 2695220 6633010 ~ 6695389 (-)
G62484 NA other upstream 2733820 6671610 ~ 6737948 (-)

Expression


Co-expression Network