G61907


Basic Information

Item Value
gene id G61907
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 4523159 ~ 4523371 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83538
GTCAGTTAGAgctgcctaaagtaaaaactaaacatggagaggcagcgtttagctactacgctgctcttaaatggaaccagttaacagagagtgttagaagagctccaacactaaacatgtttaaatccagactgaaaacctacatgtttgatcaggctttcagctcagtttaaaacactgcagctccgcccacttttattctgtaacggcaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83538 True 213 lncRNA 0.42 1 4523159 4523371

Neighbor

gene id symbol gene type direction distance location
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding downstream 61634 4447876 ~ 4461525 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding downstream 189147 4318440 ~ 4334012 (-)
LOC111192866 NA coding downstream 395851 4124790 ~ 4127308 (-)
phyh phyh,LOC107743808 coding downstream 401403 4116738 ~ 4121756 (-)
LOC103027117 LOC103027117,LOC108438787 coding downstream 408791 4100965 ~ 4114368 (-)
LOC103023194 dock4b,LOC108425388,LOC108279862,LOC107656358 coding upstream 477579 5000950 ~ 5199612 (-)
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding upstream 791186 5314557 ~ 5336399 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding upstream 933338 5456709 ~ 5494651 (-)
cmas NA coding upstream 1121138 5644509 ~ 5653023 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding upstream 1135077 5658448 ~ 5663281 (-)
LOC111192867 NA non-coding downstream 209420 4312049 ~ 4313739 (-)
G61856 NA non-coding downstream 373342 4149551 ~ 4149817 (-)
G61851 NA non-coding downstream 392195 4130339 ~ 4130964 (-)
G61837 NA non-coding downstream 423778 4083724 ~ 4099381 (-)
G61833 ppara non-coding downstream 447187 4073769 ~ 4075972 (-)
G61930 NA non-coding upstream 73195 4596566 ~ 4596986 (-)
G61940 NA non-coding upstream 97351 4620722 ~ 4621086 (-)
G61941 NA non-coding upstream 98240 4621611 ~ 4621826 (-)
G61943 NA non-coding upstream 100516 4623887 ~ 4624210 (-)
G61945 NA non-coding upstream 102126 4625497 ~ 4626107 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 97003 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 676690 3840601 ~ 3846469 (-)
G61676 NA other downstream 864891 3650845 ~ 3658268 (-)
mdm1 NA other downstream 974457 3529520 ~ 3548702 (-)
G61587 NA other downstream 1207920 3314153 ~ 3315239 (-)
G61942 NA other upstream 98842 4622213 ~ 4622577 (-)
G62377 NA other upstream 1851098 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 2109639 6633010 ~ 6695389 (-)
G62484 NA other upstream 2148239 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 2204503 6727874 ~ 6733125 (-)

Expression


Co-expression Network