G61999


Basic Information

Item Value
gene id G61999
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 4795722 ~ 4796011 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83633
ggaaatgaggttagaagtagttagttagttagaggtgttaggagagtaagagctctttgaagagctctgtcttcaggagtttattaaagatagtgagagattctcctgatctggtagtagaaggtagttagttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagtgagagattctcctgatctggtagtggaaggtagtttgttccaccattggggaactctgtatgagaacagtctggattgctttgtgtgaatatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83633 True 290 lncRNA 0.40 1 4795722 4796011

Neighbor

gene id symbol gene type direction distance location
LOC103041372 LOC103041372,LOC108425387,LOC107710120,LOC107580024,LOC100535105,LOC107658877,LOC108279439,LOC107656361,LOC107726057 coding upstream 94287 4675359 ~ 4701435 (+)
mcm10 NA coding upstream 696333 4083683 ~ 4099389 (+)
LOC103027723 ppara coding upstream 721159 4048242 ~ 4074563 (+)
atxn10 atxn10 coding upstream 826766 3956662 ~ 3968956 (+)
LOC103029111 NA coding upstream 845988 3937491 ~ 3949734 (+)
ifrd1 ifrd1,LOC108425389,LOC107726045,LOC107580056 coding downstream 455122 5251133 ~ 5261551 (+)
LOC107197570 LOC108442310 coding downstream 625757 5421768 ~ 5423304 (+)
LOC111192904 NA coding downstream 1216835 6012846 ~ 6015114 (+)
nell2 nell2b,LOC108439413,LOC108279511,LOC107587152,LOC105902601,LOC107725667,LOC107729859 coding downstream 1420800 6216811 ~ 6334340 (+)
LOC103023466 twf1,twf1b,LOC107694256,LOC107582633,LOC107729862,LOC107587151,LOC108280122 coding downstream 1613906 6409917 ~ 6426277 (+)
G61996 NA non-coding upstream 25549 4769937 ~ 4770173 (+)
G61929 NA non-coding upstream 199460 4596051 ~ 4596262 (+)
G61914 NA non-coding upstream 233846 4528087 ~ 4561876 (+)
G61873 LOC108425386,LOC107710121,LOC107656362,LOC107725991,LOC107658884 non-coding upstream 432694 4339686 ~ 4363028 (+)
LOC111192934 LOC108425385,LOC108279691,LOC107710083 non-coding upstream 470688 4319852 ~ 4325034 (+)
G62004 NA non-coding downstream 39261 4835272 ~ 4835472 (+)
G62030 NA non-coding downstream 191411 4987422 ~ 4987718 (+)
G62036 dock4,LOC108425388 non-coding downstream 203230 4999241 ~ 5002904 (+)
G62069 LOC103042505,LOC108425390,LOC108280006 non-coding downstream 515894 5311905 ~ 5315202 (+)
G62086 NA non-coding downstream 564534 5360545 ~ 5360785 (+)
G61575 NA other upstream 1491724 3296546 ~ 3303998 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other upstream 2860223 1921395 ~ 1935499 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other upstream 2986792 1714817 ~ 1808930 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other upstream 3314304 1445635 ~ 1481418 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other upstream 3752406 853526 ~ 1043316 (+)
LOC111192936 NA other downstream 944544 5740555 ~ 5765785 (+)
plxnb2 NA other downstream 986080 5782091 ~ 5967735 (+)
c7h12orf75 NA other downstream 1186225 5982236 ~ 5993994 (+)
G62455 gpr85,LOC106576049,LOC107580073 other downstream 2055219 6851230 ~ 6855762 (+)
rab19 rab19,LOC108425368,LOC106523538 other downstream 3605829 8401840 ~ 8415039 (+)

Expression


Co-expression Network