G62000


Basic Information

Item Value
gene id G62000
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 4795715 ~ 4796010 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83634
atattcacacaaagcaatccagactgttctcatacagagttccccaatggtggaacaaactaccttccactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcacttactctcctaacacctctaactaactaccttctactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagctcttactctcctaacacctctaactaactaactacttctaacctcatttccttcttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83634 True 296 lncRNA 0.40 1 4795715 4796010

Neighbor

gene id symbol gene type direction distance location
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding downstream 334190 4447876 ~ 4461525 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding downstream 461703 4318440 ~ 4334012 (-)
LOC111192866 NA coding downstream 668407 4124790 ~ 4127308 (-)
phyh phyh,LOC107743808 coding downstream 673959 4116738 ~ 4121756 (-)
LOC103027117 LOC103027117,LOC108438787 coding downstream 681347 4100965 ~ 4114368 (-)
LOC103023194 dock4b,LOC108425388,LOC108279862,LOC107656358 coding upstream 204940 5000950 ~ 5199612 (-)
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding upstream 518547 5314557 ~ 5336399 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding upstream 660699 5456709 ~ 5494651 (-)
cmas NA coding upstream 848499 5644509 ~ 5653023 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding upstream 862438 5658448 ~ 5663281 (-)
G61997 NA non-coding downstream 25542 4769963 ~ 4770173 (-)
G61955 NA non-coding downstream 160294 4635153 ~ 4635421 (-)
G61945 NA non-coding downstream 169608 4625497 ~ 4626107 (-)
G61943 NA non-coding downstream 171505 4623887 ~ 4624210 (-)
G61941 NA non-coding downstream 173889 4621611 ~ 4621826 (-)
G62054 NA non-coding upstream 246499 5042509 ~ 5043811 (-)
G62056 NA non-coding upstream 268628 5064638 ~ 5071737 (-)
G62063 NA non-coding upstream 397550 5193560 ~ 5194781 (-)
G62083 NA non-coding upstream 496845 5292855 ~ 5293062 (-)
G62084 NA non-coding upstream 555918 5351928 ~ 5352169 (-)
G61942 NA other downstream 173138 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 369559 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 949246 3840601 ~ 3846469 (-)
G61676 NA other downstream 1137447 3650845 ~ 3658268 (-)
mdm1 NA other downstream 1247013 3529520 ~ 3548702 (-)
G62377 NA other upstream 1578459 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 1837000 6633010 ~ 6695389 (-)
G62484 NA other upstream 1875600 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 1931864 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 1991332 6787342 ~ 6859670 (-)

Expression


Co-expression Network