G62103


Basic Information

Item Value
gene id G62103
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 5447828 ~ 5454163 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83750
ACAGTGCAGATTGGGATAGCCATATGAAAACTTTGCGTGAGGTATTTTGTCGGCTCAAACAAGCCTCTTTGACTTTGAATTTGGCCAAATGTGTTTTTGCTCAGGCCACAGTTACCTACTTAGGAGTGCAGGTTGGGAGAGGTCAGGTCCGGCCTGTGAGGCCCAAAGTAAAGGCTATTTTGGAGTTCCCCTTGCCCAAAACAAGGCGATGCTTGCGCAGATTTTTAGGCATGGCAAGCTATTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83750 True 247 lncRNA 0.47 2 5447828 5454163

Neighbor

gene id symbol gene type direction distance location
LOC107197570 LOC108442310 coding upstream 24524 5421768 ~ 5423304 (+)
ifrd1 ifrd1,LOC108425389,LOC107726045,LOC107580056 coding upstream 186277 5251133 ~ 5261551 (+)
LOC103041372 LOC103041372,LOC108425387,LOC107710120,LOC107580024,LOC100535105,LOC107658877,LOC108279439,LOC107656361,LOC107726057 coding upstream 746393 4675359 ~ 4701435 (+)
mcm10 NA coding upstream 1348439 4083683 ~ 4099389 (+)
LOC103027723 ppara coding upstream 1373265 4048242 ~ 4074563 (+)
LOC111192904 NA coding downstream 558683 6012846 ~ 6015114 (+)
nell2 nell2b,LOC108439413,LOC108279511,LOC107587152,LOC105902601,LOC107725667,LOC107729859 coding downstream 762648 6216811 ~ 6334340 (+)
LOC103023466 twf1,twf1b,LOC107694256,LOC107582633,LOC107729862,LOC107587151,LOC108280122 coding downstream 955754 6409917 ~ 6426277 (+)
pus7l NA coding downstream 973843 6428006 ~ 6441574 (+)
LOC103021937 LOC108439409 coding downstream 1147220 6601383 ~ 6632805 (+)
G62098 NA non-coding upstream 15460 5432076 ~ 5432368 (+)
G62086 NA non-coding upstream 87043 5360545 ~ 5360785 (+)
G62069 LOC103042505,LOC108425390,LOC108280006 non-coding upstream 132626 5311905 ~ 5315202 (+)
G62036 dock4,LOC108425388 non-coding upstream 444924 4999241 ~ 5002904 (+)
G62030 NA non-coding upstream 460110 4987422 ~ 4987718 (+)
G62146 NA non-coding downstream 71615 5525778 ~ 5527065 (+)
G62162 NA non-coding downstream 188497 5642660 ~ 5652784 (+)
G62174 NA non-coding downstream 240234 5694397 ~ 5698893 (+)
G62224 NA non-coding downstream 325532 5779695 ~ 5780084 (+)
G62258 NA non-coding downstream 543845 5998008 ~ 5998229 (+)
G61575 NA other upstream 2143830 3296546 ~ 3303998 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other upstream 3512329 1921395 ~ 1935499 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other upstream 3638898 1714817 ~ 1808930 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other upstream 3966410 1445635 ~ 1481418 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other upstream 4404512 853526 ~ 1043316 (+)
LOC111192936 NA other downstream 286392 5740555 ~ 5765785 (+)
plxnb2 NA other downstream 327928 5782091 ~ 5967735 (+)
c7h12orf75 NA other downstream 528073 5982236 ~ 5993994 (+)
G62455 gpr85,LOC106576049,LOC107580073 other downstream 1397067 6851230 ~ 6855762 (+)
rab19 rab19,LOC108425368,LOC106523538 other downstream 2947677 8401840 ~ 8415039 (+)

Expression


Co-expression Network