G62127


Basic Information

Item Value
gene id G62127
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 5445563 ~ 5452257 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83780
GCGGGGCTGGAGGAATCTTCTGATTAGGTTTACCTACACACTGACATGTATGGCAAGTGCGACAGTACTCCGCAACATCCTTCTTAAGAGAAGGCCAGAAAAAACACTTCAGAACACGGCTATATGTCTTAGTGACACCTAAGTGACCAGACCAAGGACTATCATGTGCAAGACGCAGCACATGCTTTCTGTAGGCAGTAGGCATTACTATTTGGTAAGCTGTGTGCAGCTCAGGATTTCTTACAGCTTTCCAACATCTCATAAGTAAGCCACCATCCAAGTAATAAGTTACCCGTTTATCAGACACCTCAGACAACTCAGATACCCAAGAGTAATACTTGTGTAAAGTATGGTCTGCCTTCTGTGCTTTTACAAGTTGTGCCCGACTAATTCCACAATCAGAAATTCTGACTCGTCCAACTTAACTGGAGCTACATCTCCAGAGACAACTTTGTGCTCAGACACGAGAGAACTCACATTCTCTGGACCAGGGACTAAAAACGTATCAGACAAATCCACTACATCACGCAACTTACGTGATTGAGCACGAGTGACGACACAAGCAGGGAACACAACAGAAACCTCATCATCCACAAGTGATTCAAGAGTAGGGGTATCTAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83780 True 624 lncRNA 0.44 2 5445563 5452257

Neighbor

gene id symbol gene type direction distance location
LOC103042505 LOC103042505,LOC108425390,LOC108280006 coding downstream 109164 5314557 ~ 5336399 (-)
LOC103023194 dock4b,LOC108425388,LOC108279862,LOC107656358 coding downstream 245951 5000950 ~ 5199612 (-)
LOC107197701 zgc:101560,LOC108425328,LOC108279438,LOC107656258,LOC107725970,LOC107581287,LOC107658770,LOC107584059 coding downstream 984038 4447876 ~ 4461525 (-)
LOC103040249 tnnt2e,LOC108425385,LOC108279691,LOC107658902 coding downstream 1111551 4318440 ~ 4334012 (-)
LOC111192866 NA coding downstream 1318255 4124790 ~ 4127308 (-)
LOC103037729 LOC108442307,LOC107676911,LOC107583751 coding upstream 4452 5456709 ~ 5494651 (-)
cmas NA coding upstream 192252 5644509 ~ 5653023 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding upstream 206191 5658448 ~ 5663281 (-)
abcc9 abcc9,LOC108439416 coding upstream 212644 5664901 ~ 5726283 (-)
nuak1 nuak1,nuak1a,LOC108439414,LOC107587153,LOC107729860,LOC107690659,LOC107582835 coding upstream 644083 6096340 ~ 6119766 (-)
G62121 NA non-coding downstream 13175 5432090 ~ 5432388 (-)
G62089 NA non-coding downstream 46374 5398954 ~ 5399189 (-)
G62087 NA non-coding downstream 84769 5360545 ~ 5360794 (-)
G62084 NA non-coding downstream 93394 5351928 ~ 5352169 (-)
G62083 NA non-coding downstream 152501 5292855 ~ 5293062 (-)
G62147 NA non-coding upstream 73536 5525793 ~ 5526860 (-)
G62150 NA non-coding upstream 76439 5528696 ~ 5530196 (-)
G62210 NA non-coding upstream 278771 5731028 ~ 5732187 (-)
G62217 NA non-coding upstream 307206 5759463 ~ 5761833 (-)
G62237 NA non-coding upstream 476235 5928492 ~ 5967717 (-)
G61942 NA other downstream 822986 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 1019407 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 1599094 3840601 ~ 3846469 (-)
G61676 NA other downstream 1787295 3650845 ~ 3658268 (-)
mdm1 NA other downstream 1896861 3529520 ~ 3548702 (-)
G62377 NA other upstream 922212 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 1180753 6633010 ~ 6695389 (-)
G62484 NA other upstream 1219353 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 1275617 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 1335085 6787342 ~ 6859670 (-)

Expression


Co-expression Network