c7h12orf75


Basic Information

Item Value
gene id c7h12orf75
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 5982236 ~ 5993994 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83965
tttttttttggtcttctGCCTTTAGTGTTCTGCGGGATGGGTTGTGGGAATTCCACAGCAACCAGCACAGCCGGAGGTCGGCTGGAGGCTGCCAGAGATGAAACCGATGATCCTCCTCCAGAGGATGAGAAGAGGAAGAACTATGGAGGAGTCTATGTGGGCCTACCTGCTGACCTCTGCAATGTGACTGCAGCCCAAACTCCCTCCATGCACAAAGgtctgtcctgtggagcttcaGATGAAGAAGTGCTGCGTCGTGACATCAGCATGGAAGCCACTCACTGACTGAACAGGACACAATAACCAACACTACAAGCCAATCATCTCTtctcctttatcctttatcgAGGAACTGATATAGGACCAGACCATGTACGGTCAAAGGACAGGTTGAGATGCAGAACTGAATGAATGGAACCAGGGTTTTTCTCCAGTTACTGATCCTTGTTTTGAGGAAACCTCATCTCTAAGCTGAGATCAGGCTTACTAAAGGCCAAACTATTTTGTATCTGAGAGCAAGGCCCTCATAAGTGGGTTCCACGTGGACAGGGGCTCTGTGTGGGTTTCTACTTGTTTTGTTACTGggacaacattttttaaagaaggGACCAAACTAAGACAgatctaaatgtattttaacttaatgtATATTGAAGGATTGAAGTAATCTGCATGGAAAGTCCTACCAACTTTGTCTGCGGATTTCAACCAGGTGTGACTGACCACCTGATACACTTAATTTTGAACCGTCTGGGTTCTCCTGTGTTGGATATATACTTAATTTCTTCAGGACTTCACCATCCCATACACTGCCTGCCTCCGCCTGGGTAATATAGGGTGTTTTCACTGCCACTGCTTTCTTCAGGGGAAAACAAACTTTGTAACTAGGACAGAGTCGACACACTTCAACTTCAGGTCACCATGTGCACTCAGCTCTCCCTTGTGGAATTGTAGacactgtgtgtttaagtgtgtgtttgagagtgagATAAAAAGGAAAGTGAAAGTTTGGCTTAGAGTGAAAGTGATGAACAGAGTTGAGAGTGGATTCACATGAGCTTTCTGAAAAGGGTCACCAAGTGTCATCTCTGCTTCACTCTGATCTAAAAGGACTCGCCCACATTCCTCCTCAGTGCTCTTAAAGCAACAGCTCCATCAACAGCATCATTACTTTCAGGTAACAGGGCTATAGTGTTTTGATTAGTCATGCggttaaaacattttcttatgTTGTGTATTGTTCCATTTAGAGGTGCATAAACAATGTTAGATCACTTCAAGAAATGTATTACTGCCAGAACTCAGTGAGAAAcagtattttaacattatatgcAGGGCAGTATCAGCATTACTCGACATACTCTGCCCAGCACATTTTAGAAAAttccctgctttaacacacccacAACAACTACAACTGAAAGGGCTtgataatgttaaatattaattaaatcagGTGTGTAGGAACAAGGGAAAGCCATACATTTGCAGGACAGGGGGGCATTAGGACCAGGACCAGGAATGAGGAACCCTGCTGAGTGAATTTAtgcatactggattataaggcgcactatcaataaacgtctattttctagtctattttcatacttaAGGCACACTAAATTATAAGGCGCTtcatgcgacactagtaaggaaaagGGGTGTTACcaagttttccttctaattcagcaggttttgcTGCTGGGTGgagccttatagtgtgaaaaatacagtacataaaaaagCATACCAAATATTCAAAAAAGTCCAAAagatttttaaatcaaacattAAATCTATgttacatacagacagacaacaTAAAAGCACATCAGACACACCATATGACTTAACAGTGTCTTGAAGTTGACTTACatattgtatttatgtatttgtttaattgGCATGACGACCATTTACCAGGCTGCAGGGTTTTCAAACCTTATCCACAAAGGGCTTAGCTTCTAAACAGCTAGCAACACATCTGATTCCACTGGTTTAATCAATctaaattttaaaaacaaataatttgcaaatatatata
>XM_015605262.2
TGTCCTCACcagctcttttctttctcctccgCACACACATCCCTACATCACTCACAGTTCCATTAGCCTCACTCtactctctttccctccctccctcccttcctcctctctctgtctgtcctcctttctttctttcttttttttttggtcttctGCCTTTAGTGTTCTGCGGGATGGGTTGTGGGAATTCCACAGCAACCAGCACAGCCGGAGGTCGGCTGGAGGCTGCCAGAGATGAAACCGATGATCCTCCTCCAGAGGATGAGAAGAGGAAGAACTATGGAGGAGTCTATGTGGGCCTACCTGCTGACCTCTGCAATGTGACTGCAGCCCAAACTCCCTCCATGCACAAAGgtctgtcctgtggagcttcaGATGAAGAAGTGCTGCGTCGTGACATCAGCATGGAAGCCACTCACTGACTGAACAGGACACAATAACCAACACTACAAGCCAATCATCTCTtctcctttatcctttatcgAGGAACTGATATAGGACCAGACCATGTACGGTCAAAGGACAGGTTGAGATGCAGAACTGAATGAATGGAACCAGGGTTTTTCTCCAGTTACTGATCCTTGTTTTGAGGAAACCTCATCTCTAAGCTGAGATCAGGCTTACTAAAGGCCAAACTATTTTGTATCTGAGAGCAAGGCCCTCATAAGTGGGTTCCACGTGGACAGGGGCTCTGTGTGGGTTTCTACTTGTTTTGTTACTGggacaacattttttaaagaaggGACCAAACTAAGACAgatctaaatgtattttaacttaatgtATATTGAAGGATTGAAGTAATCTGCATGGAAAGTCCTACCAACTTTGTCTGCGGATTTCAACCAGGTGTGACTGACCACCTGATACACTTAATTTTGAACCGTCTGGGTTCTCCTGTGTTGGATATATACTTAATTTCTTCAGGACTTCACCATCCCATACACTGCCTGCCTCCGCCTGGGTAATATAGGGTGTTTTCACTGCCACTGCTTTCTTCAGGGGAAAACAAACTTTGTAACTAGGACAGAGTCGACACACTTCAACTTCAGGTCACCATGTGCACTCAGCTCTCCCTTGTGGAATTGTAGacactgtgtgtttaagtgtgtgtttgagagtgagATAAAAAGGAAAGTGAAAGTTTGGCTTAGAGTGAAAGTGATGAACAGAGTTGAGAGTGGATTCACATGAGCTTTCTGAAAAGGGTCACCAAGTGTCATCTCTGCTTCACTCTGATCTAAAAGGACTCGCCCACATTCCTCCTCAGTGCTCTTAAAGCAACAGCTCCATCAACAGCATCATTACTTTCAGGTAACAGGGCTATAGTGTTTTGATTAGTCATGCggttaaaacattttcttatgTTGTGTATTGTTCCATTTAGAGGTGCATAAACAATGTTAGATCACTTCAAGAAATGTATTACTGCCAGAACTCAGTGAGAAAcagtattttaacattatatgcAGGGCAGTATCAGCATTACTCGACATACTCTGCCCAGCACATTTTAGAAAAttccctgctttaacacacccacAACAACTACAACTGAAAGGGCTtgataatgttaaatattaattaaatcagGTGTGTAGGAACAAGGGAAAGCCATACATTTGCAGGACAGGGGGGCATTAGGACCAGGACCAGGAATGAGGAACCCTGCTGAGTGAATTTAtgcatactggattataaggcgcactatcaataaacgtctattttctagtctattttcatacttaAGGCACACTAAATTATAAGGCGCTtcatgcgacactagtaaggaaaagGGGTGTTACcaagttttccttctaattcagcaggttttg
>XM_022671149.1
TGTCCTCACcagctcttttctttctcctccgCACACACATCCCTACATCACTCACAGTTCCATTAGCCTCACTCtactctctttccctccctccctcccttcctcctctctctgtctgtcctcctttctttctttcttttttttttggtcttctGCCTTTAGTGTTCTGCGGGATGGGTTGTGGGAATTCCACAGCAACCAGCACAGCCGGAGGTCGGCTGGAGGCTGCCAGAGATGATAGAACCGATGATCCTCCTCCAGAGGATGAGAAGAGGAAGAACTATGGAGGAGTCTATGTGGGCCTACCTGCTGACCTCTGCAATGTGACTGCAGCCCAAACTCCCTCCATGCACAAAGgtctgtcctgtggagcttcaGATGAAGAAGTGCTGCGTCGTGACATCAGCATGGAAGCCACTCACTGACTGAACAGGACACAATAACCAACACTACAAGCCAATCATCTCTtctcctttatcctttatcgAGGAACTGATATAGGACCAGACCATGTACGGTCAAAGGACAGGTTGAGATGCAGAACTGAATGAATGGAACCAGGGTTTTTCTCCAGTTACTGATCCTTGTTTTGAGGAAACCTCATCTCTAAGCTGAGATCAGGCTTACTAAAGGCCAAACTATTTTGTATCTGAGAGCAAGGCCCTCATAAGTGGGTTCCACGTGGACAGGGGCTCTGTGTGGGTTTCTACTTGTTTTGTTACTGggacaacattttttaaagaaggGACCAAACTAAGACAgatctaaatgtattttaacttaatgtATATTGAAGGATTGAAGTAATCTGCATGGAAAGTCCTACCAACTTTGTCTGCGGATTTCAACCAGGTGTGACTGACCACCTGATACACTTAATTTTGAACCGTCTGGGTTCTCCTGTGTTGGATATATACTTAATTTCTTCAGGACTTCACCATCCCATACACTGCCTGCCTCCGCCTGGGTAATATAGGGTGTTTTCACTGCCACTGCTTTCTTCAGGGGAAAACAAACTTTGTAACTAGGACAGAGTCGACACACTTCAACTTCAGGTCACCATGTGCACTCAGCTCTCCCTTGTGGAATTGTAGacactgtgtgtttaagtgtgtgtttgagagtgagATAAAAAGGAAAGTGAAAGTTTGGCTTAGAGTGAAAGTGATGAACAGAGTTGAGAGTGGATTCACATGAGCTTTCTGAAAAGGGTCACCAAGTGTCATCTCTGCTTCACTCTGATCTAAAAGGACTCGCCCACATTCCTCCTCAGTGCTCTTAAAGCAACAGCTCCATCAACAGCATCATTACTTTCAGGTAACAGGGCTATAGTGTTTTGATTAGTCATGCggttaaaacattttcttatgTTGTGTATTGTTCCATTTAGAGGTGCATAAACAATGTTAGATCACTTCAAGAAATGTATTACTGCCAGAACTCAGTGAGAAAcagtattttaacattatatgcAGGGCAGTATCAGCATTACTCGACATACTCTGCCCAGCACATTTTAGAAAAttccctgctttaacacacccacAACAACTACAACTGAAAGGGCTtgataatgttaaatattaattaaatcagGTGTGTAGGAACAAGGGAAAGCCATACATTTGCAGGACAGGGGGGCATTAGGACCAGGACCAGGAATGAGGAACCCTGCTGAGTGAATTTAtgcatactggattataaggcgcactatcaataaacgtctattttctagtctattttcatacttaAGGCACACTAAATTATAAGGCGCTtcatgcgacactagtaaggaaaagGGGTGTTACcaagttttccttctaattcagcaggttttg

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU83965 True 2044 TUCP 0.41 4 5982373 5993994
XM_015605262.2 False 1835 mRNA 0.44 4 5982236 5993648
XM_022671149.1 False 1838 mRNA 0.44 4 5982236 5993648

Neighbor

gene id symbol gene type direction distance location
LOC107197570 LOC108442310 coding upstream 558932 5421768 ~ 5423304 (+)
ifrd1 ifrd1,LOC108425389,LOC107726045,LOC107580056 coding upstream 720685 5251133 ~ 5261551 (+)
LOC103041372 LOC103041372,LOC108425387,LOC107710120,LOC107580024,LOC100535105,LOC107658877,LOC108279439,LOC107656361,LOC107726057 coding upstream 1280801 4675359 ~ 4701435 (+)
mcm10 NA coding upstream 1882847 4083683 ~ 4099389 (+)
LOC103027723 ppara coding upstream 1907673 4048242 ~ 4074563 (+)
LOC111192904 NA coding downstream 18852 6012846 ~ 6015114 (+)
nell2 nell2b,LOC108439413,LOC108279511,LOC107587152,LOC105902601,LOC107725667,LOC107729859 coding downstream 222817 6216811 ~ 6334340 (+)
LOC103023466 twf1,twf1b,LOC107694256,LOC107582633,LOC107729862,LOC107587151,LOC108280122 coding downstream 415923 6409917 ~ 6426277 (+)
pus7l NA coding downstream 434012 6428006 ~ 6441574 (+)
LOC103021937 LOC108439409 coding downstream 607389 6601383 ~ 6632805 (+)
G62224 NA non-coding upstream 202152 5779695 ~ 5780084 (+)
G62174 NA non-coding upstream 283343 5694397 ~ 5698893 (+)
G62162 NA non-coding upstream 329452 5642660 ~ 5652784 (+)
G62146 NA non-coding upstream 455171 5525778 ~ 5527065 (+)
G62103 NA non-coding upstream 528073 5447828 ~ 5454163 (+)
G62258 NA non-coding downstream 4014 5998008 ~ 5998229 (+)
G62276 NA non-coding downstream 40173 6034167 ~ 6040514 (+)
G62280 NA non-coding downstream 51180 6045174 ~ 6045425 (+)
G62284 NA non-coding downstream 80295 6074289 ~ 6074626 (+)
G62287 NA non-coding downstream 177219 6171213 ~ 6172168 (+)
plxnb2 NA other upstream 14501 5782091 ~ 5967735 (+)
LOC111192936 NA other upstream 216451 5740555 ~ 5765785 (+)
G61575 NA other upstream 2678238 3296546 ~ 3303998 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other upstream 4046737 1921395 ~ 1935499 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other upstream 4173306 1714817 ~ 1808930 (+)
G62455 gpr85,LOC106576049,LOC107580073 other downstream 857236 6851230 ~ 6855762 (+)
rab19 rab19,LOC108425368,LOC106523538 other downstream 2407846 8401840 ~ 8415039 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other downstream 2532224 8526218 ~ 8540123 (+)
LOC111192948 NA other downstream 3437505 9431499 ~ 9440564 (+)
G63051 NA other downstream 3652585 9646579 ~ 9650087 (+)

Expression


Co-expression Network