G62354


Basic Information

Item Value
gene id G62354
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 6335523 ~ 6335771 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84086
CTTtgcttctttctctctgccaGAGCGGCACAAAGCAATGGCAGCCAATTCTGGGCATCTGTTAGATCACATATACAGAACTGAGCAGTTAGTGCGGGTTCAGCTGTCCTACGTGGATGCGTGAGCGGAGGCTCAAGAAGATGCAGAGACTGCCTACACACGTCATGGAGGAAACACGTGTTCGTGGACGCTCTGCCAGGTTGGAAACCACACAGCAGTAACGGAGGCCCCCGGTGGGTGAGAACTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84086 True 249 lncRNA 0.55 1 6335523 6335771

Neighbor

gene id symbol gene type direction distance location
LOC103029290 prl2,LOC108439418,LOC107655571,LOC107725674,LOC107587154,LOC107582933 coding downstream 191315 6139962 ~ 6144208 (-)
nuak1 nuak1,nuak1a,LOC108439414,LOC107587153,LOC107729860,LOC107690659,LOC107582835 coding downstream 215757 6096340 ~ 6119766 (-)
abcc9 abcc9,LOC108439416 coding downstream 609240 5664901 ~ 5726283 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding downstream 672242 5658448 ~ 5663281 (-)
cmas NA coding downstream 682500 5644509 ~ 5653023 (-)
LOC111192868 NA coding upstream 386331 6722102 ~ 6723530 (-)
LOC111192905 NA coding upstream 399386 6735157 ~ 6736574 (-)
gpr85 gpr85,LOC106576049,LOC107580073 coding upstream 515397 6851168 ~ 6855742 (-)
LOC103043330 NA coding upstream 595392 6931163 ~ 6955225 (-)
tfec tfec coding upstream 1126056 7461827 ~ 7533411 (-)
G62307 NA non-coding downstream 175585 6158257 ~ 6159938 (-)
G62272 NA non-coding downstream 319820 6014004 ~ 6015703 (-)
G62237 NA non-coding downstream 367806 5928492 ~ 5967717 (-)
G62244 plxnb2a,LOC108439415,LOC108279839,LOC107587155,LOC107725571 non-coding downstream 385518 5948198 ~ 5950005 (-)
G62217 NA non-coding downstream 573690 5759463 ~ 5761833 (-)
G62361 NA non-coding upstream 19032 6354803 ~ 6355105 (-)
G62363 NA non-coding upstream 22890 6358661 ~ 6363880 (-)
G62375 NA non-coding upstream 37924 6373695 ~ 6374194 (-)
G62380 NA non-coding upstream 42176 6377947 ~ 6378414 (-)
G62404 NA non-coding upstream 94811 6430582 ~ 6531823 (-)
G61942 NA other downstream 1712946 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 1909367 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 2489054 3840601 ~ 3846469 (-)
G61676 NA other downstream 2677255 3650845 ~ 3658268 (-)
mdm1 NA other downstream 2786821 3529520 ~ 3548702 (-)
G62377 NA other upstream 38698 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 297239 6633010 ~ 6695389 (-)
G62484 NA other upstream 335839 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 392103 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 451571 6787342 ~ 6859670 (-)

Expression


Co-expression Network