G62375


Basic Information

Item Value
gene id G62375
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 6373695 ~ 6374194 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84108
GCAGCCCGTGGTCGGCCCCGGTGGTCCTTGCAAAAAAGAAGGACGGGAACTGGCGTTTTTGCGTTGATTATCGCCGACTTAACGCCGTCACGAAGCTCGACTCTTATCCGCTTCCCAGGATCGACGATACGCTAGATCAGCTATCGGGctcagcctggttcagctcgCTAGATTTGAGGAGCGGGTATTGGCAGGTGCCCCTAGCTGAAGGGGATAGGGAGAAAACCGCTTTCTCGCTCGGCTCGGCTCTATGGCATTTCACGGTGCTCCCGTTTGGGTTGTGTAACTCGCCGGCTACTTTCGAGCGTCTTATGGAGCGCGTGTTAAGCGGGATCCCGCGTTCGTGCTGCGTTGTTTACCTGGATGACGTCATGGCGCACGGGACTGACTTTCGACTCCGCGCTCTCTCACCTCGAGGTGGTGCTCGGCGCGATTCAGGCGGCTAACCTGAAGCTCAACCCGGCGAAGTGTAACCTGCTGAGGCAGCGCGTGAATTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84108 True 500 lncRNA 0.58 1 6373695 6374194

Neighbor

gene id symbol gene type direction distance location
LOC103029290 prl2,LOC108439418,LOC107655571,LOC107725674,LOC107587154,LOC107582933 coding downstream 229487 6139962 ~ 6144208 (-)
nuak1 nuak1,nuak1a,LOC108439414,LOC107587153,LOC107729860,LOC107690659,LOC107582835 coding downstream 253929 6096340 ~ 6119766 (-)
abcc9 abcc9,LOC108439416 coding downstream 647412 5664901 ~ 5726283 (-)
kcnj8 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 coding downstream 710414 5658448 ~ 5663281 (-)
cmas NA coding downstream 720672 5644509 ~ 5653023 (-)
LOC111192868 NA coding upstream 347908 6722102 ~ 6723530 (-)
LOC111192905 NA coding upstream 360963 6735157 ~ 6736574 (-)
gpr85 gpr85,LOC106576049,LOC107580073 coding upstream 476974 6851168 ~ 6855742 (-)
LOC103043330 NA coding upstream 556969 6931163 ~ 6955225 (-)
tfec tfec coding upstream 1087633 7461827 ~ 7533411 (-)
G62363 NA non-coding downstream 9815 6358661 ~ 6363880 (-)
G62361 NA non-coding downstream 18590 6354803 ~ 6355105 (-)
G62354 NA non-coding downstream 37924 6335523 ~ 6335771 (-)
G62307 NA non-coding downstream 213757 6158257 ~ 6159938 (-)
G62272 NA non-coding downstream 357992 6014004 ~ 6015703 (-)
G62380 NA non-coding upstream 3753 6377947 ~ 6378414 (-)
G62404 NA non-coding upstream 56388 6430582 ~ 6531823 (-)
G62409 pus7l non-coding upstream 66759 6440953 ~ 6444237 (-)
G62412 NA non-coding upstream 187878 6562072 ~ 6562297 (-)
G62486 NA non-coding upstream 321464 6695658 ~ 6698614 (-)
G61942 NA other downstream 1751118 4622213 ~ 4622577 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other downstream 1947539 4335118 ~ 4426156 (-)
cdpf1 cdpf1,LOC107695897 other downstream 2527226 3840601 ~ 3846469 (-)
G61676 NA other downstream 2715427 3650845 ~ 3658268 (-)
mdm1 NA other downstream 2824993 3529520 ~ 3548702 (-)
G62377 NA other upstream 275 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 258816 6633010 ~ 6695389 (-)
G62484 NA other upstream 297416 6671610 ~ 6737948 (-)
LOC111192938 NA other upstream 353680 6727874 ~ 6733125 (-)
LOC111192940 NA other upstream 413148 6787342 ~ 6859670 (-)

Expression


Co-expression Network