G62471


Basic Information

Item Value
gene id G62471
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 7102280 ~ 7102659 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84234
gctatgctaacgctggtgcagcaagccttagtggacatctggaaatctaagcttactgtaaataaactgaagcacgttactcacccaaataaacagttttcaggagaggaatctgtgtagattaatatccagcactcgtttgactttgaaagaggtagacttgtatactgagacgctccaccggcaagacacccccccccccccgtgggggaagggaaacatggcgccacccctgttcactttgatataggcaccctttctagtgtcacttaacgcgccttataatgcgatgcgccctatgtatggaaaaataccagaaaataggcgttctttgatagtgcgtcttataatacggtgcgccttatagtccgaaaaatacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84234 True 380 lncRNA 0.46 1 7102280 7102659

Neighbor

gene id symbol gene type direction distance location
foxp2 foxp2 coding upstream 8197 6953016 ~ 7094083 (+)
LOC103047680 LOC108439417 coding upstream 308413 6782248 ~ 6793867 (+)
LOC103021606 yaf2,LOC108439407,LOC102797593,LOC105018284 coding upstream 330919 6757554 ~ 6771361 (+)
zcrb1 zcrb1 coding upstream 398386 6695590 ~ 6703894 (+)
LOC103021937 LOC108439409 coding upstream 469475 6601383 ~ 6632805 (+)
mdfic mdfic coding downstream 37192 7139851 ~ 7170640 (+)
arl1 arl1 coding downstream 446426 7549085 ~ 7553250 (+)
slc5a8 slc5a8 coding downstream 501242 7603901 ~ 7612947 (+)
tmem209 tmem209,LOC107658886,LOC107725925,LOC107583965 coding downstream 518155 7620814 ~ 7631378 (+)
ahcyl2 ahcyl2,LOC106609228,LOC107725924 coding downstream 530734 7633393 ~ 7687547 (+)
LOC111192941 NA non-coding upstream 159495 6924178 ~ 6942785 (+)
G62425 NA non-coding upstream 272271 6798340 ~ 6830009 (+)
G62431 NA non-coding upstream 367452 6734481 ~ 6734828 (+)
G62420 NA non-coding upstream 428822 6665395 ~ 6673458 (+)
G62400 NA non-coding upstream 570457 6430591 ~ 6531823 (+)
G62576 NA non-coding downstream 92117 7194776 ~ 7194982 (+)
G62579 NA non-coding downstream 115824 7218483 ~ 7218703 (+)
G62581 NA non-coding downstream 131465 7234124 ~ 7234439 (+)
G62602 NA non-coding downstream 291044 7393703 ~ 7394496 (+)
G62604 NA non-coding downstream 300432 7403091 ~ 7403311 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 246518 6851230 ~ 6855762 (+)
c7h12orf75 NA other upstream 1108286 5982236 ~ 5993994 (+)
plxnb2 NA other upstream 1134545 5782091 ~ 5967735 (+)
LOC111192936 NA other upstream 1336495 5740555 ~ 5765785 (+)
G61575 NA other upstream 3798282 3296546 ~ 3303998 (+)
rab19 rab19,LOC108425368,LOC106523538 other downstream 1299181 8401840 ~ 8415039 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other downstream 1423559 8526218 ~ 8540123 (+)
LOC111192948 NA other downstream 2328840 9431499 ~ 9440564 (+)
G63051 NA other downstream 2543920 9646579 ~ 9650087 (+)
G63432 NA other downstream 5365391 12468050 ~ 12468902 (+)

Expression


Co-expression Network