G62581


Basic Information

Item Value
gene id G62581
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 7234124 ~ 7234439 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84376
tcagtttatcttgtgtatgaccttgcttttgttttctcgacgccgattattgcctttgcctctgatactggattgcttgtgtattacctggactgtgttttcactactgcctcttggattacctctgacattggatctctcgtgtatgaactctggactgtctctcgtttatggtatggttttgccttcattgctctgtttactggtgattacccattgtttctgtatcgactacgtttacatctgtttattttataataaacatatatttttatcagtatctgcacgtgtctgcaattctgtgcacaccatgaca

Function

GO:

id name namespace
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84376 True 316 lncRNA 0.39 1 7234124 7234439

Neighbor

gene id symbol gene type direction distance location
mdfic mdfic coding upstream 63484 7139851 ~ 7170640 (+)
foxp2 foxp2 coding upstream 140041 6953016 ~ 7094083 (+)
LOC103047680 LOC108439417 coding upstream 440257 6782248 ~ 6793867 (+)
LOC103021606 yaf2,LOC108439407,LOC102797593,LOC105018284 coding upstream 462763 6757554 ~ 6771361 (+)
zcrb1 zcrb1 coding upstream 530230 6695590 ~ 6703894 (+)
arl1 arl1 coding downstream 314646 7549085 ~ 7553250 (+)
slc5a8 slc5a8 coding downstream 369462 7603901 ~ 7612947 (+)
tmem209 tmem209,LOC107658886,LOC107725925,LOC107583965 coding downstream 386375 7620814 ~ 7631378 (+)
ahcyl2 ahcyl2,LOC106609228,LOC107725924 coding downstream 398954 7633393 ~ 7687547 (+)
LOC103023836 strip2 coding downstream 468673 7703112 ~ 7763123 (+)
G62579 NA non-coding upstream 15421 7218483 ~ 7218703 (+)
G62576 NA non-coding upstream 39142 7194776 ~ 7194982 (+)
G62471 NA non-coding upstream 131465 7102280 ~ 7102659 (+)
LOC111192941 NA non-coding upstream 291339 6924178 ~ 6942785 (+)
G62425 NA non-coding upstream 404115 6798340 ~ 6830009 (+)
G62602 NA non-coding downstream 159264 7393703 ~ 7394496 (+)
G62604 NA non-coding downstream 168652 7403091 ~ 7403311 (+)
G62608 NA non-coding downstream 185961 7420400 ~ 7475193 (+)
G62623 NA non-coding downstream 310949 7545388 ~ 7545710 (+)
G62628 utp20,LOC107710084 non-coding downstream 322332 7556771 ~ 7558810 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 378362 6851230 ~ 6855762 (+)
c7h12orf75 NA other upstream 1240130 5982236 ~ 5993994 (+)
plxnb2 NA other upstream 1266389 5782091 ~ 5967735 (+)
LOC111192936 NA other upstream 1468339 5740555 ~ 5765785 (+)
G61575 NA other upstream 3930126 3296546 ~ 3303998 (+)
rab19 rab19,LOC108425368,LOC106523538 other downstream 1167401 8401840 ~ 8415039 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other downstream 1291779 8526218 ~ 8540123 (+)
LOC111192948 NA other downstream 2197060 9431499 ~ 9440564 (+)
G63051 NA other downstream 2412140 9646579 ~ 9650087 (+)
G63432 NA other downstream 5233611 12468050 ~ 12468902 (+)

Expression


Co-expression Network