G62606


Basic Information

Item Value
gene id G62606
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 7403799 ~ 7404547 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84405
gttcgttgagtaggtattcggtttttaattttggtattcggatattcgttttttttctcctttccagagctccacctcactctaaccacttctgttttagcgggtcccgtcagaatatcttgcgcgcgggacagaactgaactgttattggctggagcgggagtttaatccagacgatgcgggagcaagaaaactgtaataattgtaaaaaaaaaaaaaaactaaagaaaactctcaacgcgcaggatggaccgacacacacacgcacacaccgatggggaccacactattcagcgctgctgttttaataaatatataagtaaatttgaagcattaaatgtagtttatttaatttatattaggaacgtggggcgggagcggcagaaatgtgtatgtggcgggcgggcgcgggattaaaagaagcaatttttttgcggagtggtaacgagacagaaacgcgggagcgtggaagagtgggtttaaaaatcagtctcgcgcagacctctattatacatgataaaaaaaaatgcaggctcttcgaaactgatttatataataaaacgtaaggggtaatgtggcaacagtaggggctaaatcggttacaaaagcctggcctacaaaaatgatgtttgaacgaatttcctcttatctaatataatttaaaatggtttaaaaatataaaataatttctaagcaaacgaaatatttaatattgagcttatagcccaagtgcaaaaatacaaaatcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84405 True 749 lncRNA 0.39 1 7403799 7404547

Neighbor

gene id symbol gene type direction distance location
LOC103043330 NA coding downstream 448574 6931163 ~ 6955225 (-)
gpr85 gpr85,LOC106576049,LOC107580073 coding downstream 548057 6851168 ~ 6855742 (-)
LOC111192905 NA coding downstream 667225 6735157 ~ 6736574 (-)
LOC111192868 NA coding downstream 680269 6722102 ~ 6723530 (-)
LOC103029290 prl2,LOC108439418,LOC107655571,LOC107725674,LOC107587154,LOC107582933 coding downstream 1259591 6139962 ~ 6144208 (-)
tfec tfec coding upstream 57280 7461827 ~ 7533411 (-)
utp20 utp20,LOC107583990,LOC107576235,LOC107735256 coding upstream 148718 7553265 ~ 7602288 (-)
LOC103047295 LOC108425379,LOC108280009 coding upstream 366189 7770736 ~ 7801165 (-)
LOC111192943 NA coding upstream 529603 7934150 ~ 7946647 (-)
LOC103022071 ntf3 coding upstream 553483 7958030 ~ 7989801 (-)
LOC111192869 NA non-coding downstream 32134 7344924 ~ 7371665 (-)
G62592 NA non-coding downstream 60300 7343265 ~ 7343499 (-)
G62584 NA non-coding downstream 163500 7237191 ~ 7240299 (-)
G62582 NA non-coding downstream 169360 7234203 ~ 7234439 (-)
G62558 NA non-coding downstream 301493 7102075 ~ 7102306 (-)
G62624 NA non-coding upstream 140711 7545258 ~ 7545751 (-)
G62645 arl1 non-coding upstream 144582 7549129 ~ 7553237 (-)
G62659 NA non-coding upstream 212410 7616957 ~ 7617395 (-)
G62661 tmem209,LOC107583965,LOC107725925,LOC107658886 non-coding upstream 216379 7620926 ~ 7624045 (-)
G62732 NA non-coding upstream 406006 7810553 ~ 7810782 (-)
LOC111192940 NA other downstream 544129 6787342 ~ 6859670 (-)
G62484 NA other downstream 665851 6671610 ~ 6737948 (-)
LOC111192938 NA other downstream 670674 6727874 ~ 6733125 (-)
pphln1 pphln1,LOC108279830 other downstream 708410 6633010 ~ 6695389 (-)
G62377 NA other downstream 1028819 6374469 ~ 6374980 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other upstream 212988 7617535 ~ 7619432 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other upstream 761938 8166485 ~ 8173816 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 2214114 9618661 ~ 9622788 (-)
G63217 NA other upstream 2910252 10314799 ~ 10411231 (-)
G63516 NA other upstream 4916008 12320555 ~ 12380556 (-)

Expression


Co-expression Network