G62624


Basic Information

Item Value
gene id G62624
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 7545258 ~ 7545751 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84424
CAGGCCAATAGAAGCGTTGCCTCAGGTGCTTCAGAGTCTTGGTGACACCAAAGTGCCCAGCCCCAGGTGACCCATGAACTCCCCGTAGGACCGATCCCCTAAGCGCCCGCGGTACCACCACCTGAAACACGCGCCGCCCGTTCGCCGGATCCTCCCAGGTATGGCACAGCACGCCGTCggacaaactaaaactagcccagttggagcgcaacgccttagcaatcgGGCCCAGCGGCACCACCTCCCCCCACGACGGTGTGACGTTCGCACTGAGCGCGTGTACTGCCCACGATAATTCGCGATCCGCCCGTTGCGCATCGCGgagctgctctacggacacCTGAGCCACCCCGACAGCGCCAGTAACAACCCCGGAGATTGCAGCGCAGCGTGCAGTCTcagcagatttctcctcagcacgAGCACAATGTTTGCAGTCGGCGGCCACACACGGCCGGCGCGACAAAGCATCCGCGTTACTGTGGCCACGGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84424 True 494 lncRNA 0.63 1 7545258 7545751

Neighbor

gene id symbol gene type direction distance location
tfec tfec coding downstream 11847 7461827 ~ 7533411 (-)
LOC103043330 NA coding downstream 590033 6931163 ~ 6955225 (-)
gpr85 gpr85,LOC106576049,LOC107580073 coding downstream 689516 6851168 ~ 6855742 (-)
LOC111192905 NA coding downstream 808684 6735157 ~ 6736574 (-)
LOC111192868 NA coding downstream 821728 6722102 ~ 6723530 (-)
utp20 utp20,LOC107583990,LOC107576235,LOC107735256 coding upstream 7514 7553265 ~ 7602288 (-)
LOC103047295 LOC108425379,LOC108280009 coding upstream 224985 7770736 ~ 7801165 (-)
LOC111192943 NA coding upstream 388399 7934150 ~ 7946647 (-)
LOC103022071 ntf3 coding upstream 412279 7958030 ~ 7989801 (-)
LOC103036167 rassf3,LOC106576047 coding upstream 629275 8175026 ~ 8214074 (-)
G62606 NA non-coding downstream 140711 7403799 ~ 7404547 (-)
LOC111192869 NA non-coding downstream 173593 7344924 ~ 7371665 (-)
G62592 NA non-coding downstream 201759 7343265 ~ 7343499 (-)
G62584 NA non-coding downstream 304959 7237191 ~ 7240299 (-)
G62582 NA non-coding downstream 310819 7234203 ~ 7234439 (-)
G62645 arl1 non-coding upstream 3378 7549129 ~ 7553237 (-)
G62659 NA non-coding upstream 71206 7616957 ~ 7617395 (-)
G62661 tmem209,LOC107583965,LOC107725925,LOC107658886 non-coding upstream 75175 7620926 ~ 7624045 (-)
G62732 NA non-coding upstream 264802 7810553 ~ 7810782 (-)
G62748 NA non-coding upstream 404084 7949835 ~ 7951434 (-)
LOC111192940 NA other downstream 685588 6787342 ~ 6859670 (-)
G62484 NA other downstream 807310 6671610 ~ 6737948 (-)
LOC111192938 NA other downstream 812133 6727874 ~ 6733125 (-)
pphln1 pphln1,LOC108279830 other downstream 849869 6633010 ~ 6695389 (-)
G62377 NA other downstream 1170278 6374469 ~ 6374980 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other upstream 71784 7617535 ~ 7619432 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other upstream 620734 8166485 ~ 8173816 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 2072910 9618661 ~ 9622788 (-)
G63217 NA other upstream 2769048 10314799 ~ 10411231 (-)
G63516 NA other upstream 4774804 12320555 ~ 12380556 (-)

Expression


Co-expression Network