G62661 (tmem209,LOC107583965,LOC107725925,LOC107658886)


Basic Information

Item Value
gene id G62661
gene name tmem209,LOC107583965,LOC107725925,LOC107658886
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 7620926 ~ 7624045 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84482
ACACTTTGCCAAAGGCCACAGACGGAGAAAAAGGTCCTCCACCACCTGGTGATGATGGGTTGCTCAGAGGTGGGCTGAACCCAGACACACAGCTGGGAGAGAACTTTGGGCTGGTGCTGGGAGGCCGAGCAGGACTAAAACTCAGGACATTCTGTCCCTGCAGAGGAGAGGACTGGGGCGACACTGGAATCTCCTTCTTCTCTGGCTTCTGGGGAGGAGAGGCATGAATTCCAGAGTTGCGCAGGCCAAGAAGACGATGTTGCTCAGGAGAGATAGCAATTGTTGAAGGGGCCATGGTGTACTTGAAGTATTTCCAAAAATCAAAGACTGCATTAAGGCTGAAGAGGGAAGCTAGGGCCAGCTCAATGTACCAGATCGGCCAGTAGGTAATGTTGTAGTATCTACTGAGCAGCTTTCCTGACATTTCTGTGTAAATCATTCCAGCAAGAGACACGTTCAGGACTGCCCAAGCGAGGACCACCTGTCGCTCCTGCTCTTCCCTCCTCAACCTCATCGTCTTGTCGATGAGAGAGGGCACGCCTTCTCGGCTCGGTGTCATGTTTTAAGCTCTCCCTCAGGCTGTTAGCTAGCCAATGCTAACGTAATCTCCTTAAGAAGTAacgaaaaacataaaataaaaagcatacaCAACTTCTTCTCAAAGCCAACAGGGATAAATACACTTTCCCTGACCCCCTTAACAAG

Function

symbol description
tmem209 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM209 (transmembrane protein 209).

NR:

description
PREDICTED: transmembrane protein 209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84482 True 705 lncRNA 0.50 5 7620926 7624045

Neighbor

gene id symbol gene type direction distance location
utp20 utp20,LOC107583990,LOC107576235,LOC107735256 coding downstream 18638 7553265 ~ 7602288 (-)
tfec tfec coding downstream 87515 7461827 ~ 7533411 (-)
LOC103043330 NA coding downstream 665701 6931163 ~ 6955225 (-)
gpr85 gpr85,LOC106576049,LOC107580073 coding downstream 765184 6851168 ~ 6855742 (-)
LOC111192905 NA coding downstream 884352 6735157 ~ 6736574 (-)
LOC103047295 LOC108425379,LOC108280009 coding upstream 146691 7770736 ~ 7801165 (-)
LOC111192943 NA coding upstream 310105 7934150 ~ 7946647 (-)
LOC103022071 ntf3 coding upstream 333985 7958030 ~ 7989801 (-)
LOC103036167 rassf3,LOC106576047 coding upstream 550981 8175026 ~ 8214074 (-)
LOC103043012 NA coding upstream 600606 8224651 ~ 8252909 (-)
G62659 NA non-coding downstream 3531 7616957 ~ 7617395 (-)
G62645 arl1 non-coding downstream 67689 7549129 ~ 7553237 (-)
G62624 NA non-coding downstream 75175 7545258 ~ 7545751 (-)
G62606 NA non-coding downstream 216379 7403799 ~ 7404547 (-)
LOC111192869 NA non-coding downstream 249261 7344924 ~ 7371665 (-)
G62732 NA non-coding upstream 186508 7810553 ~ 7810782 (-)
G62748 NA non-coding upstream 325790 7949835 ~ 7951434 (-)
G62821 NA non-coding upstream 653640 8277685 ~ 8279994 (-)
G62832 NA non-coding upstream 708463 8332508 ~ 8333323 (-)
G62858 NA non-coding upstream 809670 8433715 ~ 8434396 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 1494 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 761256 6787342 ~ 6859670 (-)
G62484 NA other downstream 882978 6671610 ~ 6737948 (-)
LOC111192938 NA other downstream 887801 6727874 ~ 6733125 (-)
pphln1 pphln1,LOC108279830 other downstream 925537 6633010 ~ 6695389 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other upstream 542440 8166485 ~ 8173816 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 1994616 9618661 ~ 9622788 (-)
G63217 NA other upstream 2690754 10314799 ~ 10411231 (-)
G63516 NA other upstream 4696510 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 4741423 12365468 ~ 12500663 (-)

Expression


Co-expression Network