G62873


Basic Information

Item Value
gene id G62873
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 8525568 ~ 8525767 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84758
ttttaagaaacataaAACTGAATATATCTAgctatatgcagctctggaaaataattagagatcacctaaaaatgatgagtttgtctgattttaccaaattaaaaaacctctggaatataatcaagaggaagatggatgatcacaagccatcaaaccaaactgaactgctcacATTTtcgcaccagaagtggcatgaagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84758 True 200 lncRNA 0.34 1 8525568 8525767

Neighbor

gene id symbol gene type direction distance location
LOC103044524 NA coding upstream 531 8517980 ~ 8525037 (+)
LOC107197608 LOC107197608,LOC108425361 coding upstream 9034 8510515 ~ 8516534 (+)
ckap4 NA coding upstream 93578 8428552 ~ 8431990 (+)
LOC103021322 LOC108425378,LOC108279462 coding upstream 604344 7820355 ~ 7921224 (+)
smkr1 NA coding upstream 755325 7766846 ~ 7770243 (+)
sapcd1 NA coding downstream 41530 8567297 ~ 8572672 (+)
LOC103045143 LOC108425356,LOC108425352,LOC108280014,LOC103363517,LOC107719870,LOC104927640,LOC107699203 coding downstream 263588 8789355 ~ 8882696 (+)
LOC103042395 LOC108425352,LOC108425356,LOC103363517,LOC107719870,LOC107699203,LOC104927640 coding downstream 530656 9056423 ~ 9168847 (+)
kiaa0930 kiaa0930,zgc:172139,LOC102798964 coding downstream 670365 9196132 ~ 9246664 (+)
phf21b phf21b coding downstream 768053 9293820 ~ 9423281 (+)
G62805 pacsin2,LOC103038884,LOC108279716 non-coding upstream 29279 8464127 ~ 8496289 (+)
G62810 arfgap3 non-coding upstream 69657 8451492 ~ 8455911 (+)
G62807 NA non-coding upstream 91186 8433736 ~ 8434382 (+)
LOC107197604 NA non-coding upstream 150873 8370763 ~ 8374695 (+)
G62710 NA non-coding upstream 574116 7949838 ~ 7951452 (+)
G62902 NA non-coding downstream 88451 8614218 ~ 8614523 (+)
G62945 NA non-coding downstream 430984 8956751 ~ 8956951 (+)
G62947 NA non-coding downstream 470901 8996668 ~ 8998907 (+)
G62949 NA non-coding downstream 487932 9013699 ~ 9013925 (+)
G62951 NA non-coding downstream 507036 9032803 ~ 9033574 (+)
rab19 rab19,LOC108425368,LOC106523538 other upstream 110529 8401840 ~ 8415039 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 1669806 6851230 ~ 6855762 (+)
c7h12orf75 NA other upstream 2531574 5982236 ~ 5993994 (+)
plxnb2 NA other upstream 2557833 5782091 ~ 5967735 (+)
LOC111192936 NA other upstream 2759783 5740555 ~ 5765785 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other downstream 451 8526218 ~ 8540123 (+)
LOC111192948 NA other downstream 905732 9431499 ~ 9440564 (+)
G63051 NA other downstream 1120812 9646579 ~ 9650087 (+)
G63432 NA other downstream 3942283 12468050 ~ 12468902 (+)
LOC111192955 NA other downstream 4630459 13156226 ~ 13161367 (+)

Expression


Co-expression Network