G62907


Basic Information

Item Value
gene id G62907
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 8646885 ~ 8647296 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU84808
tatcaatttactatttgttattcctgaagccattataggcattacagtattaaaatcagctacAATTTCCTTTTTTGCctagttaacaaatacattcaaatcatccttcaagctacagtattaatatacttaaaagggctgtagttactgctctattttactgggataaaaacactcatacagtagaaacagcagcaggaggtgtTCTGATTTCTCTGCAGGACAGAGCTAGACCAGCGTTTGACTCTCTTCTTCTTTGATGGTGCTGTTCTGCATGGCGCTCCGCAGCACCCTCTAGCGGTGTGGCGGTATGAGAGAAATGCATTCCGGTTCAAGTTCACCCGGGTTTTACCGAATGAGGTACGAGTGGATCAAATTCAGCAGATTCAGCAAATTCACCATAGGAATTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84808 True 412 lncRNA 0.41 1 8646885 8647296

Neighbor

gene id symbol gene type direction distance location
LOC103042080 LOC108425318 coding downstream 56569 8587268 ~ 8590316 (-)
LOC103041774 NA coding downstream 93320 8542470 ~ 8553565 (-)
ttll1 ttll1,LOC102779306 coding downstream 139306 8498224 ~ 8507579 (-)
LOC103038884 pacsin2,LOC103038884,LOC108279716 coding downstream 150492 8464126 ~ 8496393 (-)
arfgap3 arfgap3,LOC108279714 coding downstream 184331 8447310 ~ 8462554 (-)
LOC103045460 NA coding upstream 523695 9170991 ~ 9192565 (-)
LOC103042700 LOC108425355,LOC108279935 coding upstream 576418 9223714 ~ 9227248 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding upstream 605041 9252337 ~ 9266879 (-)
arhgap8 arhgap8 coding upstream 787818 9435114 ~ 9459694 (-)
fbln1 NA coding upstream 1203634 9850930 ~ 9864019 (-)
G62858 NA non-coding downstream 212489 8433715 ~ 8434396 (-)
G62832 NA non-coding downstream 313562 8332508 ~ 8333323 (-)
G62821 NA non-coding downstream 366891 8277685 ~ 8279994 (-)
G62748 NA non-coding downstream 695451 7949835 ~ 7951434 (-)
G62732 NA non-coding downstream 836103 7810553 ~ 7810782 (-)
G62950 NA non-coding upstream 373193 9020489 ~ 9020985 (-)
G63034 NA non-coding upstream 759109 9406405 ~ 9409548 (-)
LOC103022044 NA non-coding upstream 767747 9415043 ~ 9418822 (-)
G63041 NA non-coding upstream 834904 9482200 ~ 9482517 (-)
G63042 NA non-coding upstream 838726 9486022 ~ 9486233 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 473069 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 1027453 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 1787215 6787342 ~ 6859670 (-)
G62484 NA other downstream 1908937 6671610 ~ 6737948 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 971365 9618661 ~ 9622788 (-)
G63217 NA other upstream 1667503 10314799 ~ 10411231 (-)
G63516 NA other upstream 3673259 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 3718172 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 4158675 12805971 ~ 13027498 (-)

Expression


Co-expression Network