G63041


Basic Information

Item Value
gene id G63041
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 9482200 ~ 9482517 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85055
gtaggttctcctcattacaaagcgttctatatctcttgtctcagtttatcttgtgtatgaccttgcctttgttttctcgacgccgattattgcctttgcctctgatattggattacctgtgtattacctggactgtgttttcactactgcctcttggattacctctgacattggatctctcgtgtatgaactctggactgtctctcgtttatggtatggttttgtctacattgctcctGTTATTGGTGATTACCCACTTTTCTGTACCGACtacgtcttacatctgtttattttataataaacaatcttttatcagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85055 True 318 lncRNA 0.39 1 9482200 9482517

Neighbor

gene id symbol gene type direction distance location
arhgap8 arhgap8 coding downstream 22506 9435114 ~ 9459694 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding downstream 215321 9252337 ~ 9266879 (-)
LOC103042700 LOC108425355,LOC108279935 coding downstream 254952 9223714 ~ 9227248 (-)
LOC103045460 NA coding downstream 289635 9170991 ~ 9192565 (-)
LOC103042080 LOC108425318 coding downstream 891884 8587268 ~ 8590316 (-)
fbln1 NA coding upstream 368413 9850930 ~ 9864019 (-)
LOC103036113 LOC108279889 coding upstream 382843 9865360 ~ 9887488 (-)
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding upstream 503787 9986304 ~ 10032671 (-)
creld2 creld2 coding upstream 912413 10394930 ~ 10405872 (-)
zbed4 zbed4,LOC107735570 coding upstream 942072 10424589 ~ 10433454 (-)
LOC103022044 NA non-coding downstream 63378 9415043 ~ 9418822 (-)
G63034 NA non-coding downstream 72652 9406405 ~ 9409548 (-)
G62950 NA non-coding downstream 461215 9020489 ~ 9020985 (-)
G62907 NA non-coding downstream 834904 8646885 ~ 8647296 (-)
G62858 NA non-coding downstream 1047804 8433715 ~ 8434396 (-)
G63042 NA non-coding upstream 3505 9486022 ~ 9486233 (-)
G63105 NA non-coding upstream 155171 9637688 ~ 9642240 (-)
G63107 NA non-coding upstream 165035 9647552 ~ 9650188 (-)
G63125 NA non-coding upstream 408499 9891016 ~ 9891758 (-)
G63131 kdm5a non-coding upstream 425036 9907553 ~ 9909248 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 1308384 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 1862768 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 2622530 6787342 ~ 6859670 (-)
G62484 NA other downstream 2744252 6671610 ~ 6737948 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other upstream 136144 9618661 ~ 9622788 (-)
G63217 NA other upstream 832282 10314799 ~ 10411231 (-)
G63516 NA other upstream 2838038 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 2882951 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 3323454 12805971 ~ 13027498 (-)

Expression


Co-expression Network