G63044


Basic Information

Item Value
gene id G63044
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 9500304 ~ 9500694 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85058
acggtctgttattgatcccgcccataagcagcccttttaccataaccacaccttttttcaatagagccgaataaagttttaaaaaccgaattctctggggatataaaaatttgacaatataagcagaggttacactagctgttgcatttaaataaagaaggtagaattacagtatattagaaaaaaacgtgattgaaagttgtctgttttgccattgaaacctatggggatgggtgggtttacacagctttctgcagccgaacagcagggggcgcccgacctgtggtggcttcacttttaagagacgatgctctgtccagctatatacagtctatgatctTTACAAATTGAAAATTAGGGTttataaactaaaactaaccaATTAATCAAT

Function

GO:

id name namespace
GO:0022857 transmembrane transporter activity molecular_function
GO:0005215 transporter activity molecular_function

KEGG:

id description
ko00330 Arginine and proline metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU85058 True 391 lncRNA 0.38 1 9500304 9500694

Neighbor

gene id symbol gene type direction distance location
phf21b phf21b coding upstream 77023 9293820 ~ 9423281 (+)
kiaa0930 kiaa0930,zgc:172139,LOC102798964 coding upstream 253640 9196132 ~ 9246664 (+)
LOC103042395 LOC108425352,LOC108425356,LOC103363517,LOC107719870,LOC107699203,LOC104927640 coding upstream 331457 9056423 ~ 9168847 (+)
LOC103045143 LOC108425356,LOC108425352,LOC108280014,LOC103363517,LOC107719870,LOC104927640,LOC107699203 coding upstream 617608 8789355 ~ 8882696 (+)
sapcd1 NA coding upstream 927632 8567297 ~ 8572672 (+)
LOC103035489 LOC108425317,LOC107562148,LOC107741714,LOC107687569 coding downstream 117972 9618666 ~ 9639280 (+)
LOC103035797 kcna1a,kcna1l,LOC108425346,LOC108279524,LOC105912431,LOC105913409 coding downstream 184663 9685357 ~ 9693289 (+)
LOC103038615 LOC108425345,LOC108279527,LOC107741715,LOC107601000 coding downstream 279777 9780471 ~ 9783136 (+)
LOC103036813 akr1d1,LOC108425343,LOC104966316,LOC107383989 coding downstream 388523 9889217 ~ 9898004 (+)
LOC103038308 kdm5a coding downstream 399791 9900485 ~ 9925895 (+)
G63027 NA non-coding upstream 17776 9482262 ~ 9482528 (+)
G63022 arhgap8 non-coding upstream 40616 9433659 ~ 9459688 (+)
G63012 NA non-coding upstream 88685 9406331 ~ 9411619 (+)
G62951 NA non-coding upstream 466730 9032803 ~ 9033574 (+)
G62949 NA non-coding upstream 486379 9013699 ~ 9013925 (+)
G63047 NA non-coding downstream 33879 9534573 ~ 9534831 (+)
G63050 NA non-coding downstream 141787 9642481 ~ 9644511 (+)
G63067 NA non-coding downstream 310178 9810872 ~ 9866501 (+)
G63081 LOC108279889 non-coding downstream 381421 9882115 ~ 9884275 (+)
G63090 NA non-coding downstream 471558 9972252 ~ 9976111 (+)
LOC111192948 NA other upstream 59740 9431499 ~ 9440564 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other upstream 960181 8526218 ~ 8540123 (+)
rab19 rab19,LOC108425368,LOC106523538 other upstream 1085265 8401840 ~ 8415039 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 2644542 6851230 ~ 6855762 (+)
c7h12orf75 NA other upstream 3506310 5982236 ~ 5993994 (+)
G63051 NA other downstream 145885 9646579 ~ 9650087 (+)
G63432 NA other downstream 2967356 12468050 ~ 12468902 (+)
LOC111192955 NA other downstream 3655532 13156226 ~ 13161367 (+)
gata3 gata3,LOC107555822 other downstream 4666535 14167229 ~ 14242234 (+)
G64015 NA other downstream 5244041 14744735 ~ 14745082 (+)

Expression


Co-expression Network