G63051


Basic Information

Item Value
gene id G63051
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 9646579 ~ 9650087 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85065
TTTCACCTCAACTGATGAGAAAGTAATATACTAAACTAATTAAGTTTTGTCACATAGTTATCGAATGAAATAAGTTGCCTGTTTCACCAAAGTTATATAGTGCAGAGAGAGTCAAAAGTACCCTCTCTCTTTTGCAGGGATGCTCAGTGAAATATCAACATGAGTTTGAAGCTGTTACTTTAAGGTAATAAtgctacataatgctgcttAAGCCAGTTGTACcagaaaaaaagtgatttaaaatgagtgaaaatGTATCTTTCGTCAAAAAAGTCAGATTTGAGATGATTTTACTTGCCAAGATTTCATTTTGTGCAGTCTACATCGCACAAATGTTGCTTATTGAGAAATTTGCACAGCAAATGTTCTTCCATTTGTCTTTTATTGATGTGCAATTGTTTAAACAAGGGTTGTGCAATGAAAAACAcgttaaacatgattttttttttattaaacttcaCTTCCATACACATTTCATGATGTTGGCTGTACAGGacatgttttattataatagAGATAAGTATTTGTGCTTTGGCCTACCATGTGCAATGCTGTACAactgtatacattttatatatgtttcatTTTTGTGCCATCTTTTGTGCAATTCAGCTGGTAGATTCAGGGCATGGAATATAATATACAAGTCCAGTACTTCAGAAATCTAAAGCTAGTATGAGGAATAAAGGGAGGGACAAAGAATTATTATAGAGTTACATATTTAAACTACACTGTATTAATAGCTAGATTTGCATTTGCAGGTTCATAGTTCAGTATGGTGAGCAATAATGCATGTTTTATCATAAAGAAATCATtggaaaaaatatgaatatatatgtatattgttcAAACACAAAAAAGGAGAATTGCACACATGACAGTTGTATTTGTCTGGTTGTATTTGTATACACACCCTTAAATGGTGCCTTACATAGTCTTATATCATATTGTCATATTGTTATCAAGATCTCATTACCGAATgcaattagctagctagcctctACAGATGATGTAGGTATAGGGAATAGTATTGATCGTGTTGTTTATCTTTAGATGACTGTAGAATCCTGTGGATTGAAAGGTAGAGTCTAGGAGCTTCGATACCTAATACAGCAACATCATTGGCTGTGCTCGATGAACGGACTGAAGAAAAAGTACAGTATGTGAATGTACTGAATGTACTGAGTCTTCCAGGATGGTACTCTGGAAggactgtgtgtttttaaatatgtgCAAGGCAATACACCCTGTTTCTCTTCTCTGGATGTTTATAGCTGGGCCCCCATGTATTCCATCAACTCAAAATGCCTTATCATACAAAGATATCCGAGTATAGGACCAAAATGAGCACATTCATGTCTGGCCATTGCTTACAGTCAGTTTTCCAGAGGACAGTACATCAGTTAAAAGTCAATTTACGCTTCCTGATTGCTCtatagtagggctgcacaatatcagaaaaaatatatctaaatacTTTGTTGTTCTGCAATATTAATCCAAATCTCTAAAATGCTGAGGAACAGTCAAAACCAATCCAATTAATTTTTCTATGAATAGTACAGCCACACAGTGTGCATAATATGTGCTAACGATTAATATAATTCTAAGTCAAATCCATTTAGATttagtaaaagttaaaaaaaataaaagagaccacttacaaatgatgagtttcttctattttaccaatttgaaaattgaaaacctctgtaatataattaagaggaagatggatgatcaaaagccatcaaaccaagctgaacggcttgaattttttgcaccaggagtaaaggcataaagttatccaaaagcagtgtgtaagacaggtggagtagaacatgccaagatgcatgaaaactgtgattaaaaaccagggttattccaccaaatattaatttctaaactcttaaaactttatgaatatgaacttgttttctttgcattatttgaggtattttttgtgatttcagccatttctcgttttctacaaataaatgctctaaatgaatttggaagaaatgttgtctgtagtttatagaataaaacaacgatgttcatttaactcaaacatatagctataaatagctaaatcagaaaaactgattcagaatctgaagtggtctcttaatttttccagagctgtatatatgagcGTATATGAGcatattagtattagcattagcctctactTGCAGACTGTAACTTAACTCTTTAGtttaccttctgagaactctcctcagtaCTGCTCGTAATGACATCCTGAATGGTTAAAAGACTTGAAACTAGACTTGGATTAAAACGTCTAATACCCGATCTATAATGATATGCCTGAATCAGCATGGATCTTGATCCACTGGTTGTATCAAGACATCTGTACTTGCAgtattataaaaagaaatacagaaatgttCACCAGATTTCTCTAGATTGGgatccaacatgtcatgatattaataatgcactctgtgAATCAGAAATTgaagcaaaataaacaatatttcatCACAGTTAGTTCAGAACCTATTTTAACTagcggagtgtttataatcaAAAGGTTGGAttttctcatcttttttaacaaaaaatcttTCAATACACAGCGATAATAGAACTGttgtataattgcaataatacctgaggtttgtgctataatgtgtaatattggacTCATgcctacgaccgcagcacagcagtgccaatattacacattatagcacggaCCTTGAgagtattattgcttaattgtgGTGTGAACAATGAACAGAGAGAGTTGCAGAATGATGTGTATAAATTAATTTGCCTTATGTGACATTGCATGCCCTGCAATGTAATAACGGCacatggtaaaattatgtaTAGTGCAACCCTACTCTACAGTCAACCAGTGTGTATTATAAGCCTCAACTTCACTCATTAACCTTCTCAACATCTAGTTTTTACAGCACATACTGTAAGTCTCAAACACCTCCTCCCAAGCAGTATGATGTAAGCAATAGTGCAACACAACccacagtatactgtatatctagTTAACTGCATTATTATGAATGTGCTGCCAGTTGACAGAGCATGATCCAAACCCCAGTGCATTCCCCACCATGTGACGCAGCACAAACGCCGCCACAATGGTTTGTTCCTCAAAACCAGTACGCTCGATAGTGTAGTCTCCAGTCTTCGGTCCTGTGTGCATTCATtctgtgtgaatgtgaatgtgtgtgtatgggttcAAATGCAGGTATTGGCCTACTGTGAAGCCTTGCCCATCTGTAACACGTAAGCACTGTGCTGCAGTCTTTCATCATCCAGTGTGTTCCGTCCATTGTGAGCTTCTGTACTGAACCATTAGCCATCAACTCGTAGTGTTCGAAAAACAACAGAGACCTTAAAACTAAATGGGCGTTCTGTACAGGTGTCTTATGTCTTGTGTTCTTAACATGACCGGGTGATGAATTAAATGTGTGGCTTAATATGTACAATgtgtgaaatacagtaaattatcaAACGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85065 True 3509 TUCP 0.35 1 9646579 9650087

Neighbor

gene id symbol gene type direction distance location
LOC103035489 LOC108425317,LOC107562148,LOC107741714,LOC107687569 coding upstream 7299 9618666 ~ 9639280 (+)
phf21b phf21b coding upstream 223298 9293820 ~ 9423281 (+)
kiaa0930 kiaa0930,zgc:172139,LOC102798964 coding upstream 399915 9196132 ~ 9246664 (+)
LOC103042395 LOC108425352,LOC108425356,LOC103363517,LOC107719870,LOC107699203,LOC104927640 coding upstream 477732 9056423 ~ 9168847 (+)
LOC103045143 LOC108425356,LOC108425352,LOC108280014,LOC103363517,LOC107719870,LOC104927640,LOC107699203 coding upstream 763883 8789355 ~ 8882696 (+)
LOC103035797 kcna1a,kcna1l,LOC108425346,LOC108279524,LOC105912431,LOC105913409 coding downstream 35270 9685357 ~ 9693289 (+)
LOC103038615 LOC108425345,LOC108279527,LOC107741715,LOC107601000 coding downstream 130384 9780471 ~ 9783136 (+)
LOC103036813 akr1d1,LOC108425343,LOC104966316,LOC107383989 coding downstream 239130 9889217 ~ 9898004 (+)
LOC103038308 kdm5a coding downstream 250398 9900485 ~ 9925895 (+)
usp15 usp15 coding downstream 279421 9929508 ~ 9967291 (+)
G63050 NA non-coding upstream 2068 9642481 ~ 9644511 (+)
G63047 NA non-coding upstream 111748 9534573 ~ 9534831 (+)
G63044 NA non-coding upstream 145885 9500304 ~ 9500694 (+)
G63027 NA non-coding upstream 164051 9482262 ~ 9482528 (+)
G63022 arhgap8 non-coding upstream 186891 9433659 ~ 9459688 (+)
G63067 NA non-coding downstream 160785 9810872 ~ 9866501 (+)
G63081 LOC108279889 non-coding downstream 232028 9882115 ~ 9884275 (+)
G63090 NA non-coding downstream 322165 9972252 ~ 9976111 (+)
G63091 NA non-coding downstream 330431 9980518 ~ 9984728 (+)
G63093 ppm1h,LOC108279434,LOC101061494,LOC105896948,LOC106575999 non-coding downstream 341671 9991758 ~ 9998972 (+)
LOC111192948 NA other upstream 206015 9431499 ~ 9440564 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other upstream 1106456 8526218 ~ 8540123 (+)
rab19 rab19,LOC108425368,LOC106523538 other upstream 1231540 8401840 ~ 8415039 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 2790817 6851230 ~ 6855762 (+)
c7h12orf75 NA other upstream 3652585 5982236 ~ 5993994 (+)
G63432 NA other downstream 2817963 12468050 ~ 12468902 (+)
LOC111192955 NA other downstream 3506139 13156226 ~ 13161367 (+)
gata3 gata3,LOC107555822 other downstream 4517142 14167229 ~ 14242234 (+)
G64015 NA other downstream 5094648 14744735 ~ 14745082 (+)
arid2 arid2,LOC107707985,LOC107555896 other downstream 6745239 16395326 ~ 16426623 (+)

Expression


Co-expression Network