G63067


Basic Information

Item Value
gene id G63067
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 9810872 ~ 9866501 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85086
cacaggccggCAGGTCCAGTCAGACCCACATATCTCTCCTTCCCGTGTCCgcactgctgctactgctgccgCACTGTTTATCCCAGCAGCCCACAGCTATGTGGACAAGGATGGAGTGAGACAGGACAGTgtggagagacagagggagggaagggggggatgactgagagaaagagagagagagagaaagagagataacaAGGAAGCATTTCCAAATTGCCTAATAATCAGCCCTCCTGATCTTTACTTCCATTCTCTTCCTCTGCTGCTTTCTCTGGGCTGCAGTTCTCTTGCGGTTTCTCAGAGCTTTCTGCGTCCTCCTCAGCTTCTTCTATGTCCTCCACAGGTGCTCCAATCTGAGGTTCTTCTTCAAGAGGGGCTCCAATCTGAGGCTCCGTAGTCTCTTCCACTGGAGGTGGATCTGGAGAGGCTGCTTTGGGAGATGTTTCTGGTGCAGTTTTTGAAGGTTCTGGAGATGTTTGTGGAGGTTCTGGCACAGTTTTTGTAGGTTCAGAAGCAGTATCTGCTGGATCTGGATCAGTTTGTGGCAGTTCTGGAGCTGCCTGTGGGGTTTCTGGAGCTGTTTGAAGGGGTTCTGTCGCTGTTTGAGGCGGTTCAGGAGCTGCTGGTGGGGGTTCTACTTCTGCAGCAGTACTTTCCTTCTTTACATCAGGGAAGGTTCGTTCTGGATACAAGAGCTTCAGCTGCTCTTCAAAATAGCTCTGCAGATTAACACCAACACTGGACATCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85086 True 754 lncRNA 0.51 2 9810872 9866501

Neighbor

gene id symbol gene type direction distance location
LOC103038615 LOC108425345,LOC108279527,LOC107741715,LOC107601000 coding upstream 27736 9780471 ~ 9783136 (+)
LOC103035797 kcna1a,kcna1l,LOC108425346,LOC108279524,LOC105912431,LOC105913409 coding upstream 117583 9685357 ~ 9693289 (+)
LOC103035489 LOC108425317,LOC107562148,LOC107741714,LOC107687569 coding upstream 171592 9618666 ~ 9639280 (+)
phf21b phf21b coding upstream 387591 9293820 ~ 9423281 (+)
kiaa0930 kiaa0930,zgc:172139,LOC102798964 coding upstream 564208 9196132 ~ 9246664 (+)
LOC103036813 akr1d1,LOC108425343,LOC104966316,LOC107383989 coding downstream 22716 9889217 ~ 9898004 (+)
LOC103038308 kdm5a coding downstream 33984 9900485 ~ 9925895 (+)
usp15 usp15 coding downstream 63007 9929508 ~ 9967291 (+)
il17rel NA coding downstream 175702 10042203 ~ 10070882 (+)
pim3 pim3 coding downstream 443940 10310441 ~ 10316421 (+)
G63050 NA non-coding upstream 166361 9642481 ~ 9644511 (+)
G63047 NA non-coding upstream 276041 9534573 ~ 9534831 (+)
G63044 NA non-coding upstream 310178 9500304 ~ 9500694 (+)
G63027 NA non-coding upstream 328344 9482262 ~ 9482528 (+)
G63022 arhgap8 non-coding upstream 351184 9433659 ~ 9459688 (+)
G63081 LOC108279889 non-coding downstream 15614 9882115 ~ 9884275 (+)
G63090 NA non-coding downstream 105751 9972252 ~ 9976111 (+)
G63091 NA non-coding downstream 114017 9980518 ~ 9984728 (+)
G63093 ppm1h,LOC108279434,LOC101061494,LOC105896948,LOC106575999 non-coding downstream 125257 9991758 ~ 9998972 (+)
G63101 NA non-coding downstream 206613 10073114 ~ 10073399 (+)
G63051 NA other upstream 160785 9646579 ~ 9650087 (+)
LOC111192948 NA other upstream 370308 9431499 ~ 9440564 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other upstream 1270749 8526218 ~ 8540123 (+)
rab19 rab19,LOC108425368,LOC106523538 other upstream 1395833 8401840 ~ 8415039 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 2955110 6851230 ~ 6855762 (+)
G63432 NA other downstream 2601549 12468050 ~ 12468902 (+)
LOC111192955 NA other downstream 3289725 13156226 ~ 13161367 (+)
gata3 gata3,LOC107555822 other downstream 4300728 14167229 ~ 14242234 (+)
G64015 NA other downstream 4878234 14744735 ~ 14745082 (+)
arid2 arid2,LOC107707985,LOC107555896 other downstream 6528825 16395326 ~ 16426623 (+)

Expression


Co-expression Network