G63175


Basic Information

Item Value
gene id G63175
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 10096099 ~ 10096842 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85242
TTAgaccagggatgggcaactggcggcccgggggccgcacacggccctcgtcatcactcagtgcggcccgctgccaaacaaccacgaaaattgacattgacatccagtccattgtgagccagcaggccaaaccacagctctctcattagcttcaataaatgttgggcctctgtggtctagttttctgctattattgaatgagctatttgcaatcagtttttaaatcttttttgttctttgttataaatgagttcaaatgccttttgcacttttctaagcaaatgttttgtccttgttgcttatgaaggacttgttataatgaacttattttacacagaggaactactgtatttgcaatcagttttttaagcaaactttttgttctttgatatgaaggacttcctttttgcactgttttttaagcaaacggtttgtcttttgccgtattaaaatgcattaatatgcagaaaatagttgttgataaatgttggtgctgtaaacatacagatataaattcatataaaatttgttcttattgaaaataatttgtagcgtttttcatattcaattatttgaagtgcgaggtcatgtggccctccaatggtcatgctgaaaaaaatgtggccctctccatcatggaagttgcccatccctg

Function

GO: NA

KEGG:

id description
ko00100 Steroid biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU85242 True 655 lncRNA 0.38 2 10096099 10096842

Neighbor

gene id symbol gene type direction distance location
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding downstream 63428 9986304 ~ 10032671 (-)
LOC103036113 LOC108279889 coding downstream 208611 9865360 ~ 9887488 (-)
fbln1 NA coding downstream 232080 9850930 ~ 9864019 (-)
arhgap8 arhgap8 coding downstream 636405 9435114 ~ 9459694 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding downstream 829220 9252337 ~ 9266879 (-)
creld2 creld2 coding upstream 298088 10394930 ~ 10405872 (-)
zbed4 zbed4,LOC107735570 coding upstream 327747 10424589 ~ 10433454 (-)
LOC103026034 gramd4,gramd4a,LOC108427081,LOC107721158 coding upstream 1627625 11724467 ~ 11779849 (-)
LOC111192951 LOC108427081 coding upstream 1683713 11780555 ~ 11805577 (-)
LOC103026753 LOC108427079 coding upstream 1728004 11824846 ~ 11965807 (-)
G63171 NA non-coding downstream 18104 10077679 ~ 10077995 (-)
G63170 NA non-coding downstream 21622 10074229 ~ 10074477 (-)
G63169 NA non-coding downstream 21962 10073558 ~ 10074137 (-)
G63136 NA non-coding downstream 179477 9914565 ~ 9916622 (-)
G63131 kdm5a non-coding downstream 186851 9907553 ~ 9909248 (-)
G63183 NA non-coding upstream 37354 10134196 ~ 10135349 (-)
G63189 NA non-coding upstream 90330 10187172 ~ 10187427 (-)
G63190 NA non-coding upstream 97734 10194576 ~ 10194786 (-)
G63219 pim3 non-coding upstream 215916 10312758 ~ 10314633 (-)
G63247 NA non-coding upstream 467833 10564675 ~ 10565626 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 473311 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 1922283 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 2476667 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 3236429 6787342 ~ 6859670 (-)
LOC111192938 NA other downstream 3362974 6727874 ~ 6733125 (-)
G63217 NA other upstream 217957 10314799 ~ 10411231 (-)
G63516 NA other upstream 2223713 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 2268626 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 2709129 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 3744351 13841193 ~ 13887868 (-)

Expression


Co-expression Network