G63219 (pim3)


Basic Information

Item Value
gene id G63219
gene name pim3
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 10312758 ~ 10314633 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85296
tattattattattattattattattattatgttgatTATAGCATTTTTACACAAAGAATTGTAAATAATGTGTTAACCATTCTGTTTAGCATGTCTAGTGGCATTCCTCAGGGTTTAATTGAAGGACCTATGAGATTGTTGTAAAATAGGACAATGCAACGTAGCCATGCGAGTGAAATGAGGGGGATTGTATACGGAGCCTAAGGGTTTTAATTATCTAGTCTATGACATTTCTATAATCTGTCTTATCATCATAATAATACCTGTTTACCCTGCTACAGTAAACTAGGCAAATTTATTATAAGACTCCTACAGAATTTCCACAGTAATGCTGTTCTCTTTAGTCTACTGGAGTATGAGAACAGCATGTACAATACACACACCTGCAGAGATTCGCCTCCTGAAGTAAAGGCGCCCTCTGATGATCTCCTCGTCCTGCTCAAAGGGGATGTCTCCACAGACCATGTCGTACAGCAGCACCCCTAGCGACCAGATGGTTGCCGAGCGTCCGTGGTATCTGTGGAAACGGATCCACTCAGGCGGACTGTACACTCTTGTACCGTCAAAGTCTGTGTACACTGTGTCCTTAAGAAATGCCCCAGATCCAAAGTCGATGAGTTTGAGGTCTCCAGTGCGAAGATCCACCAGCAGGTTCTCATCCTTGATGTCTCTGTGAACCACCCCACAGCTGTAGCAGTGGCGCACAGCCTCCAGCACCTGGCGGAAAAACCCTCGCGCCGTGGCCTCGTCCAGAGCACCCTTCTCGGTAATGAAGTCGAAAAGGTCCTTGACCAGCTCCGGTCTCTCCATAACGATTAACCAGCCGTCCGGCCTCTCGTACCAGTCCAGCAGCTTGATCACACCTCGAAACGATGAGCCTACTTTCTTCAGCAGCACGATTTCCAAAGGCACC

Function

symbol description
pim3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human PIM3 (Pim-3 proto-oncogene, serine/threonine kinase).

NR:

description
serine/threonine-protein kinase pim-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85296 True 913 lncRNA 0.46 2 10312758 10314633

Neighbor

gene id symbol gene type direction distance location
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding downstream 280087 9986304 ~ 10032671 (-)
LOC103036113 LOC108279889 coding downstream 425270 9865360 ~ 9887488 (-)
fbln1 NA coding downstream 448739 9850930 ~ 9864019 (-)
arhgap8 arhgap8 coding downstream 853064 9435114 ~ 9459694 (-)
nup50 nup50,LOC107699201,LOC107719874,LOC107562145,LOC107601009 coding downstream 1045879 9252337 ~ 9266879 (-)
creld2 creld2 coding upstream 80297 10394930 ~ 10405872 (-)
zbed4 zbed4,LOC107735570 coding upstream 109956 10424589 ~ 10433454 (-)
LOC103026034 gramd4,gramd4a,LOC108427081,LOC107721158 coding upstream 1409834 11724467 ~ 11779849 (-)
LOC111192951 LOC108427081 coding upstream 1465922 11780555 ~ 11805577 (-)
LOC103026753 LOC108427079 coding upstream 1510213 11824846 ~ 11965807 (-)
G63190 NA non-coding downstream 117972 10194576 ~ 10194786 (-)
G63189 NA non-coding downstream 125331 10187172 ~ 10187427 (-)
G63183 NA non-coding downstream 177409 10134196 ~ 10135349 (-)
G63175 NA non-coding downstream 215916 10096099 ~ 10096842 (-)
G63171 NA non-coding downstream 234763 10077679 ~ 10077995 (-)
G63247 NA non-coding upstream 250042 10564675 ~ 10565626 (-)
G63248 NA non-coding upstream 275713 10590346 ~ 10590610 (-)
G63255 NA non-coding upstream 315496 10630129 ~ 10630460 (-)
G63259 NA non-coding upstream 343571 10658204 ~ 10658424 (-)
G63265 NA non-coding upstream 1316009 11630642 ~ 11635515 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 689970 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 2138942 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 2693326 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 3453088 6787342 ~ 6859670 (-)
LOC111192938 NA other downstream 3579633 6727874 ~ 6733125 (-)
G63217 NA other upstream 166 10314799 ~ 10411231 (-)
G63516 NA other upstream 2005922 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 2050835 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 2491338 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 3526560 13841193 ~ 13887868 (-)

Expression


Co-expression Network