G63247


Basic Information

Item Value
gene id G63247
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 10564675 ~ 10565626 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85336
cagctccactaatggcttatagagtaagatggatgatgagcagctgatctgtggtggtggatggagaagagctgacttcagaaacttccagtctggccagacagaggacatgagagcctgagggtccaacatccatcggtatcgggtcagacaggtgggcagtcagtaactcggaggaaggcagagagatggaattagttttgactggatttatgtaaaacagagaatataaaacattatcagagtgtggctaatgactccggcagatctaaataaaacagcctaactaaaggcagagagccagaaggtaacatagacatggaggctccctgaaacactggcatccacccactccaccgtccacaaacctgagtgaccgtgtgcagtgggagaacagcagcaccagcatctcagtttaccacaattccctctgtccatgaacccctgaatctgcagccttatctaaagggaaaaacattaattaccaaaagctaaactaaacaagtaagttttcagtctagacttaaagattgagactgtgtctgagtcccgaacatattcggggagattattccagagttgaggcgctttataagagaaagctcttcctcctgcagagctcctctgaattttaggaactactaataaaccagcaccctgagatctaagtaatcgcggtggttcataataggagatgaggtctcgtaaatactcaggagcgagcccgtgtagggctttatacgttaacaggagaattttatagtctatgcggaatttgactggaagccaatgcagtgctgatagtactggactaatatgctcaaattttctagttttagtaaggaccctggctgcagcattttgaactagctgaagtttatttaagttactgccggaacatccagacagtagcgcattacaataatctagccttgaggtaataaaggcatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85336 True 952 lncRNA 0.44 1 10564675 10565626

Neighbor

gene id symbol gene type direction distance location
zbed4 zbed4,LOC107735570 coding downstream 131221 10424589 ~ 10433454 (-)
creld2 creld2 coding downstream 158803 10394930 ~ 10405872 (-)
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding downstream 532004 9986304 ~ 10032671 (-)
LOC103036113 LOC108279889 coding downstream 677187 9865360 ~ 9887488 (-)
fbln1 NA coding downstream 700656 9850930 ~ 9864019 (-)
LOC103026034 gramd4,gramd4a,LOC108427081,LOC107721158 coding upstream 1158841 11724467 ~ 11779849 (-)
LOC111192951 LOC108427081 coding upstream 1214929 11780555 ~ 11805577 (-)
LOC103026753 LOC108427079 coding upstream 1259220 11824846 ~ 11965807 (-)
trmu trmu,LOC102792203 coding upstream 1405171 11970797 ~ 11978759 (-)
tprkb tprkb coding upstream 1421288 11986914 ~ 11990505 (-)
G63219 pim3 non-coding downstream 250042 10312758 ~ 10314633 (-)
G63190 NA non-coding downstream 369889 10194576 ~ 10194786 (-)
G63189 NA non-coding downstream 377248 10187172 ~ 10187427 (-)
G63183 NA non-coding downstream 429326 10134196 ~ 10135349 (-)
G63175 NA non-coding downstream 467833 10096099 ~ 10096842 (-)
G63248 NA non-coding upstream 24720 10590346 ~ 10590610 (-)
G63255 NA non-coding upstream 64503 10630129 ~ 10630460 (-)
G63259 NA non-coding upstream 92578 10658204 ~ 10658424 (-)
G63265 NA non-coding upstream 1065016 11630642 ~ 11635515 (-)
G63320 NA non-coding upstream 1251470 11817096 ~ 11823077 (-)
G63217 NA other downstream 153444 10314799 ~ 10411231 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 941887 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 2390859 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 2945243 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 3705005 6787342 ~ 6859670 (-)
G63516 NA other upstream 1754929 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 1799842 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 2240345 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 3275567 13841193 ~ 13887868 (-)
G64034 NA other upstream 4219695 14785321 ~ 14786149 (-)

Expression


Co-expression Network