G63248


Basic Information

Item Value
gene id G63248
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 10590346 ~ 10590610 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85337
actgcactgtaaaacccgataagttgactaaactcaaaacttttgttgtaaccgattacctaataaattttaagttcatgtaatataatttttaagtacagtgaacttaagaaatacatttacatatatatttaaaattaatattttcctgtatttagtcttctttctggtttcattcaactatttttttaaatactcatagaaaagtagatgaaagaaaacagtaaagaattaaaagtactgagagcacagcgagaacacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85337 True 265 lncRNA 0.26 1 10590346 10590610

Neighbor

gene id symbol gene type direction distance location
zbed4 zbed4,LOC107735570 coding downstream 156892 10424589 ~ 10433454 (-)
creld2 creld2 coding downstream 184474 10394930 ~ 10405872 (-)
LOC103042295 LOC108425305,LOC105896948,LOC105020256,LOC108279434,LOC105913407 coding downstream 557675 9986304 ~ 10032671 (-)
LOC103036113 LOC108279889 coding downstream 702858 9865360 ~ 9887488 (-)
fbln1 NA coding downstream 726327 9850930 ~ 9864019 (-)
LOC103026034 gramd4,gramd4a,LOC108427081,LOC107721158 coding upstream 1133857 11724467 ~ 11779849 (-)
LOC111192951 LOC108427081 coding upstream 1189945 11780555 ~ 11805577 (-)
LOC103026753 LOC108427079 coding upstream 1234236 11824846 ~ 11965807 (-)
trmu trmu,LOC102792203 coding upstream 1380187 11970797 ~ 11978759 (-)
tprkb tprkb coding upstream 1396304 11986914 ~ 11990505 (-)
G63247 NA non-coding downstream 24720 10564675 ~ 10565626 (-)
G63219 pim3 non-coding downstream 275713 10312758 ~ 10314633 (-)
G63190 NA non-coding downstream 395560 10194576 ~ 10194786 (-)
G63189 NA non-coding downstream 402919 10187172 ~ 10187427 (-)
G63183 NA non-coding downstream 454997 10134196 ~ 10135349 (-)
G63255 NA non-coding upstream 39519 10630129 ~ 10630460 (-)
G63259 NA non-coding upstream 67594 10658204 ~ 10658424 (-)
G63265 NA non-coding upstream 1040032 11630642 ~ 11635515 (-)
G63320 NA non-coding upstream 1226486 11817096 ~ 11823077 (-)
G63384 NA non-coding upstream 1392686 11983296 ~ 11983560 (-)
G63217 NA other downstream 179115 10314799 ~ 10411231 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 967558 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 2416530 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 2970914 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 3730676 6787342 ~ 6859670 (-)
G63516 NA other upstream 1729945 12320555 ~ 12380556 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other upstream 1774858 12365468 ~ 12500663 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 2215361 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 3250583 13841193 ~ 13887868 (-)
G64034 NA other upstream 4194711 14785321 ~ 14786149 (-)

Expression


Co-expression Network