G63285


Basic Information

Item Value
gene id G63285
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 11811156 ~ 11811590 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85397
CTGCAGCCGGTAAACAGAGATATGGAAATAATCTTGAATTGTCAGCTATTGGGCAACATTTGCAATGTTGATTTAGCGTAGTTTCTTTTGTAGAGCCCAATacacctcttaacacgccctgtcATAGTTAATATcttgctgtgtttatgaataattatggacacccaatatgccattttaaagcctagaatctctgcttttcagtatCTAGCATATTTAGCTGTATGTTCTTtcaggaaataaacatttagggcgaaatatgccttgtttaTTAGAATTATGATTCATAATTTTTGAATCTGGTAAAGCTTTATATACTGTCTTTAAGCTACTGCTTTGAGGATTCACTATTTCGTTTTGAtcttttagaattcgttagatttctgtttctgttctagatctgtttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85397 True 411 lncRNA 0.33 2 11811156 11811590

Neighbor

gene id symbol gene type direction distance location
brd1 brd1 coding upstream 1346438 10440014 ~ 10464718 (+)
alg12 alg12 coding upstream 1390347 10409021 ~ 10420809 (+)
pim3 pim3 coding upstream 1494735 10310441 ~ 10316421 (+)
il17rel NA coding upstream 1740274 10042203 ~ 10070882 (+)
usp15 usp15 coding upstream 1843865 9929508 ~ 9967291 (+)
LOC103028484 srr,LOC108427077,LOC108279919,LOC106575990 coding downstream 168781 11980371 ~ 11986784 (+)
alg10 LOC108427075 coding downstream 179010 11990600 ~ 11997857 (+)
c7h12orf40 NA coding downstream 549594 12361184 ~ 12373369 (+)
LOC103032294 NA coding downstream 699298 12510888 ~ 12556587 (+)
LOC103032798 NA coding downstream 747070 12558660 ~ 12595497 (+)
G63269 NA non-coding upstream 92614 11718022 ~ 11718542 (+)
G63268 NA non-coding upstream 109450 11701418 ~ 11701706 (+)
G63260 NA non-coding upstream 175610 11630642 ~ 11635546 (+)
G63254 NA non-coding upstream 1180683 10630128 ~ 10630473 (+)
G63246 NA non-coding upstream 1245363 10564696 ~ 10565793 (+)
G63303 NA non-coding downstream 145295 11956885 ~ 11975553 (+)
G63328 NA non-coding downstream 175408 11986998 ~ 11990396 (+)
G63329 NA non-coding downstream 195695 12007285 ~ 12007519 (+)
G63410 NA non-coding downstream 565556 12377146 ~ 12378927 (+)
LOC111192954 NA non-coding downstream 877729 12689319 ~ 12696748 (+)
G63051 NA other upstream 2161069 9646579 ~ 9650087 (+)
LOC111192948 NA other upstream 2370592 9431499 ~ 9440564 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other upstream 3271033 8526218 ~ 8540123 (+)
rab19 rab19,LOC108425368,LOC106523538 other upstream 3396117 8401840 ~ 8415039 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 4955394 6851230 ~ 6855762 (+)
G63432 NA other downstream 656460 12468050 ~ 12468902 (+)
LOC111192955 NA other downstream 1344636 13156226 ~ 13161367 (+)
gata3 gata3,LOC107555822 other downstream 2355639 14167229 ~ 14242234 (+)
G64015 NA other downstream 2933145 14744735 ~ 14745082 (+)
arid2 arid2,LOC107707985,LOC107555896 other downstream 4583736 16395326 ~ 16426623 (+)

Expression


Co-expression Network