G63432


Basic Information

Item Value
gene id G63432
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 12468050 ~ 12468902 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85565
caaTCAGGTATTGAAAACACCTGTGGATGTCAACGAGCAGCAATCAAGCATGATAAGCACCAATTAGGCAGATTTAAAAGGACTGTGATACTCAGCTTCCTTCTAGACACCTACTGGTGTGTTTACAAGCATGGTGAAGGCAAGAGAATGGTCCcagaagacaagagaagaggTTATTGCTCTTCACAAGAATGGCAATGGATATAAAAAGATTGCGAAGTTGTTAAATATTCCAAGAGACACTATCAGAAGTATCATTCGCAAGTTCAAGTTAAAGGGCACAGTGGAAACGTTACCTGGTCGTGGCAGAAAGAAGATCCTGACCGCGACTGCTGTGCGCTACCTGAAGCGTAATGTGGAGAAAAATCCCCGCGTGACTGCTAAGGAACTGAAAAAGACCTGTCAGAGGCGCGCACTGCATAACGAAGACCTCCATGCCAGAACTCCCAGGCGCACCCCCTTGCTGACtccaaagaacaagaaaagtcGACTGCagtatgccaaaagtcatgtggACAAGCCACAAAGGTTTTGGGACAGTgtactgtggtcagatgaaactAAATTAGAACTGTTTGGGACAATGGACCAGCGCTATGTTTGGAGGAGGAAGAACCAGGCTTATGAACAAAAGAACACCTTgcctactgtgaagcatggcgGGGGGTCAATTATgctttggggctgttttgcttCTAATGGTACAGGAAAGCTTCAACGTGTGCAGGGTACCATGAATTCCCTTCAGTACCAGGAGATCTTGAAGGAAAATGTGATGGAGTCAGTCACAAACCTGCGGCTTGGGAGACGTTGGaccttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85565 True 821 TUCP 0.47 2 12468050 12468902

Neighbor

gene id symbol gene type direction distance location
c7h12orf40 NA coding upstream 94681 12361184 ~ 12373369 (+)
alg10 LOC108427075 coding upstream 470193 11990600 ~ 11997857 (+)
LOC103028484 srr,LOC108427077,LOC108279919,LOC106575990 coding upstream 481266 11980371 ~ 11986784 (+)
brd1 brd1 coding upstream 2003332 10440014 ~ 10464718 (+)
alg12 alg12 coding upstream 2047241 10409021 ~ 10420809 (+)
LOC103032294 NA coding downstream 41986 12510888 ~ 12556587 (+)
LOC103032798 NA coding downstream 89758 12558660 ~ 12595497 (+)
LOC103033113 LOC108427023 coding downstream 135208 12604110 ~ 12626928 (+)
LOC103023853 NA coding downstream 164377 12633279 ~ 12650099 (+)
iapp iapp coding downstream 184120 12653022 ~ 12658646 (+)
G63410 NA non-coding upstream 89123 12377146 ~ 12378927 (+)
G63329 NA non-coding upstream 460531 12007285 ~ 12007519 (+)
G63328 NA non-coding upstream 477654 11986998 ~ 11990396 (+)
G63303 NA non-coding upstream 492497 11956885 ~ 11975553 (+)
G63285 NA non-coding upstream 656460 11811156 ~ 11811590 (+)
LOC111192954 NA non-coding downstream 220417 12689319 ~ 12696748 (+)
G63460 NA non-coding downstream 230146 12699048 ~ 12746828 (+)
G63465 NA non-coding downstream 338965 12807867 ~ 12811899 (+)
G63488 NA non-coding downstream 689423 13158325 ~ 13163098 (+)
G63490 NA non-coding downstream 701900 13170802 ~ 13193768 (+)
G63051 NA other upstream 2817963 9646579 ~ 9650087 (+)
LOC111192948 NA other upstream 3027486 9431499 ~ 9440564 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other upstream 3927927 8526218 ~ 8540123 (+)
rab19 rab19,LOC108425368,LOC106523538 other upstream 4053011 8401840 ~ 8415039 (+)
G62455 gpr85,LOC106576049,LOC107580073 other upstream 5612288 6851230 ~ 6855762 (+)
LOC111192955 NA other downstream 687324 13156226 ~ 13161367 (+)
gata3 gata3,LOC107555822 other downstream 1698327 14167229 ~ 14242234 (+)
G64015 NA other downstream 2275833 14744735 ~ 14745082 (+)
arid2 arid2,LOC107707985,LOC107555896 other downstream 3926424 16395326 ~ 16426623 (+)
G64289 NA other downstream 3970318 16439220 ~ 16442449 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G48481 NA non-coding NC_053116.1 CM020913.1 9920048 ~ 9920808 (+)
bowfin (Amia calva) G51735 NA non-coding CM030126.1 CM030126.1 12721082 ~ 12722980 (+)