G63516


Basic Information

Item Value
gene id G63516
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 12320555 ~ 12380556 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU85708
TAGAACACATTCCCTTGATAATATGAACTTaaaactgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacatgtg
>TU85709
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacatgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85708 True 1000 TUCP 0.01 2 12320555 12365739
TU85709 False 1000 lncRNA 0.01 2 12320555 12380556

Neighbor

gene id symbol gene type direction distance location
LOC103029962 LOC108427070,LOC108279892 coding downstream 230 12255305 ~ 12320325 (-)
LOC103023221 cpne8,LOC108427072,LOC108279828,LOC104935575 coding downstream 73996 12029314 ~ 12246559 (-)
tprkb tprkb coding downstream 330050 11986914 ~ 11990505 (-)
trmu trmu,LOC102792203 coding downstream 341796 11970797 ~ 11978759 (-)
LOC103026753 LOC108427079 coding downstream 354748 11824846 ~ 11965807 (-)
LOC103033667 NA coding upstream 303670 12684226 ~ 12689035 (-)
LOC103024791 parp11,LOC108280019,LOC107726831,LOC107597042,LOC107689238,LOC105020367,LOC102790985,LOC107748476 coding upstream 311034 12691590 ~ 12699482 (-)
LOC103034510 tnni1d,LOC108280151,LOC108427054,LOC107597014,LOC103374597 coding upstream 869096 13249652 ~ 13260256 (-)
scyl2 scyl2,si:ch211-244b2.1,LOC107755162 coding upstream 1015929 13396485 ~ 13422065 (-)
depdc4 LOC108427048 coding upstream 1043082 13423638 ~ 13432932 (-)
G63384 NA non-coding downstream 336995 11983296 ~ 11983560 (-)
G63320 NA non-coding downstream 497478 11817096 ~ 11823077 (-)
G63265 NA non-coding downstream 685040 11630642 ~ 11635515 (-)
G63259 NA non-coding downstream 1662131 10658204 ~ 10658424 (-)
G63255 NA non-coding downstream 1690095 10630129 ~ 10630460 (-)
G63538 LOC108427067 non-coding upstream 147333 12527889 ~ 12529641 (-)
G63540 NA non-coding upstream 154409 12534965 ~ 12538377 (-)
G63552 NA non-coding upstream 202221 12582777 ~ 12587477 (-)
G63607 NA non-coding upstream 419909 12800465 ~ 12803555 (-)
G63617 NA non-coding upstream 471718 12852274 ~ 12854361 (-)
G63217 NA other downstream 1909324 10314799 ~ 10411231 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 2697767 9618661 ~ 9622788 (-)
LOC111192870 zgc:194209,LOC107584030,LOC107658744 other downstream 4146739 8166485 ~ 8173816 (-)
LOC103046475 lyrm5a,etfrf1,lyrm5,LOC103046475 other downstream 4701123 7617535 ~ 7619432 (-)
LOC111192940 NA other downstream 5460885 6787342 ~ 6859670 (-)
LOC103025415 iqsec3,LOC107689235 other upstream 425415 12805971 ~ 13027498 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 1460637 13841193 ~ 13887868 (-)
G64034 NA other upstream 2404765 14785321 ~ 14786149 (-)
LOC111192906 NA other upstream 2609673 14990229 ~ 14992730 (-)
G64060 NA other upstream 2613608 14994164 ~ 14994832 (-)

Expression


Co-expression Network