G63791


Basic Information

Item Value
gene id G63791
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 13573720 ~ 13677259 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86075
aaaagcagtgtgtaagactggtggaggagaacatgcctagatgcatgaaagcagtgattaaaaaccagggatattccaccaaatattgatttctaaaactttatgaatatgaacttgttttctttgcaatatttaaggtctgaaagctctgcatcttttttgttaattcagtcatttctcattttctgcaaataaatgctttaaattataatatttttttatttgtaacttgggagaaatgtactctgtagtttatagagtaaaataacaatgttgattttactcaaacatatacctataaatagcaaaaatagataaactgattcagaaactaaagtggtctccagagctgtacttattttttaatttttatttctaacgAGGCATGAAtgaatatagaaatataaaatattctaacAAGACCAATTGTGGCATTGGAAATGCGAAAGGATAACTTTCTTAGTTAGGAACTAAAGCTCCCCAGCTGCACCCTGAATCTCTCAGAAGCCAGCAGTAAACAAGCTCCTCAGCCATTGTAAAGATCTGTTGGCTGACAGTTTTGGTGGCATTTACTGTGCCAGCATTTCTGTTAACAGACAAAATGTCCTGCAAGCACTTTGCCATGACTTTGCAGGATGTTCTGGCTGAAAGGACATTTGAAATGAGATAAAAAGGGCAGAATGTtacttaattattgttttttttttttatcgtttcacttcacttttgagaaacgtgagagataaagaaaaggaAACCTGAATGTGGGTGAGCTGATGTATATGTTATGCTTATATGCTCCCAGCTTTAAAATTGTTTTCTGAGACGGAAACAGTTTGCAATGGTACTATAGTGCTAACCACTTGTTAATGAGGCCTTTACGagtgtaaaaagtgttaaacatatAGCTGAGAACCACAGTGTGAAGTTTCACACATTTGGTCCACACTTGGACACAGTTGGTCCATTAACTTGGTTGTCACCATGCCAGTGGTAGAGGCAGATATCTTTGAATTTACATgtgttcaaatatttatttatgcttgATATGGTCTAATATACTGTAGAatatactgtgttttaaaaattcCAGATCAGCCATTAGAATTGTTCACAATAAACATGATAAATTACTTAATGTTAATTATCTAGAAACAACTCTGTGTCTCTGGTGCATCCCTTGTATCTCCACACTGTTAATGTAACATGTATTTACCTTGCGCTGTGTGTGGCTGAGCTGAGTAAACACAACATTTGGCTGATCCACTCTGGGAGTTCAAGCATGCCAGAAATGTTGGTATTATTATGGCCTACTTTTCCTGTTGAGTGGGAGTGGTGTGAagctcaacacacacagcttaacATATGCACACAATGAAGCAGTGTTTATGGAGTAGACGCCTCTGAACGatgtaatatattgtttttttatatattggcAATATATTCCAGAATACACTCATTGTCAaagaaatagttgcacccagaataAAGTGTTTTGACTGCaatgctattcagaaggaagaCAAAATTTCTAGCAATATTTAttaagctacacatacagaagtagtgtgtgaactacatgggttggacaatgaaactgaaacacctggttttagaccacaataatttattgtcctgacgggcaattctggtggaaacagggtgcacattgaattctgccgtgatttgttcagccgtggttttatgttttttggaaacaatccgggttagcacccgaacatcccttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86075 True 1751 lncRNA 0.36 3 13573720 13677259

Neighbor

gene id symbol gene type direction distance location
ndufa12 ndufa12,LOC107667714,LOC107755161 coding upstream 8620 13561436 ~ 13565100 (+)
LOC103030426 nr2c1,LOC107689225,LOC107755159 coding upstream 16130 13544952 ~ 13557590 (+)
fgd6 NA coding upstream 34670 13507378 ~ 13539050 (+)
usp44 usp44,LOC107755158,LOC107748469,LOC107667716,LOC107597009 coding upstream 128048 13433569 ~ 13445672 (+)
LOC103026035 NA coding upstream 177457 13386538 ~ 13396263 (+)
rbm17 rbm17,LOC107748463,LOC107755150,LOC107663450 coding downstream 81069 13758328 ~ 13773588 (+)
pfkfb3 pfkfb3 coding downstream 108987 13786246 ~ 13806954 (+)
itih5 itih5 coding downstream 337857 14015116 ~ 14042802 (+)
itih2 itih2,LOC107748478,LOC107666937 coding downstream 379526 14056785 ~ 14081113 (+)
atp5c1 atp5c1,LOC107728502,LOC107748457 coding downstream 413073 14090332 ~ 14098546 (+)
G63755 NA non-coding upstream 30209 13542613 ~ 13543511 (+)
G63756 NA non-coding upstream 31719 13541161 ~ 13542001 (+)
G63738 NA non-coding upstream 64123 13451746 ~ 13509597 (+)
G63749 vezt,LOC107567659,LOC107667718 non-coding upstream 86102 13486399 ~ 13487618 (+)
G63743 NA non-coding upstream 98300 13472434 ~ 13475420 (+)
G63813 NA non-coding downstream 34650 13711909 ~ 13713440 (+)
G63827 NA non-coding downstream 77606 13754865 ~ 13755370 (+)
G63978 NA non-coding downstream 705623 14382882 ~ 14383150 (+)
G63979 NA non-coding downstream 755712 14432971 ~ 14433787 (+)
G63992 NA non-coding downstream 796767 14474026 ~ 14474399 (+)
LOC111192955 NA other upstream 412353 13156226 ~ 13161367 (+)
G63432 NA other upstream 1104818 12468050 ~ 12468902 (+)
G63051 NA other upstream 3923633 9646579 ~ 9650087 (+)
LOC111192948 NA other upstream 4133156 9431499 ~ 9440564 (+)
LOC103041471 slc37a3,LOC106609230,LOC106576065,LOC107719875,LOC107758206,LOC107601005,LOC107562143 other upstream 5033597 8526218 ~ 8540123 (+)
gata3 gata3,LOC107555822 other downstream 489970 14167229 ~ 14242234 (+)
G64015 NA other downstream 1067476 14744735 ~ 14745082 (+)
arid2 arid2,LOC107707985,LOC107555896 other downstream 2718067 16395326 ~ 16426623 (+)
G64289 NA other downstream 2761961 16439220 ~ 16442449 (+)
G64431 NA other downstream 3075784 16753043 ~ 16753560 (+)

Expression


Co-expression Network