G63849


Basic Information

Item Value
gene id G63849
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 13758263 ~ 13760003 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86164
CTGCAGTTTAATgttataaaaacagaatgcaaaccTTTGCTTGTGTCAGAGCagcttttttcactttcagctGCGACTGAAGCAGTTTGAAGTTCTTCGACCATCCTTCAGTCTTGGCGTCACTGGTAGCGACCCCCAAATCATCGTAAAGAGACATTGGTTCACCTGTGATTAAATTCCAAACGGGAGCGAGAAACCTCAATATTCCACCACATTTAGCACAGCATGCTAACGCGCCGTCTCCTCGTCGCTTCTAATGACGTCATCAAAAGTGGCCAAACGAAGTGCTGCCCTCTAGTGTGAGAATCACAGAAGCTCAGCATCATCCAACAACACAGTCCACACTCCCACCTATCACAACCACAAACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86164 True 370 lncRNA 0.46 2 13758263 13760003

Neighbor

gene id symbol gene type direction distance location
LOC103038708 NA coding downstream 2781 13712234 ~ 13755482 (-)
LOC103026945 LOC108427039 coding downstream 65413 13646396 ~ 13692850 (-)
vezt vezt coding downstream 250969 13474323 ~ 13507294 (-)
LOC103026355 metap2,metap2a,LOC107755160,LOC107689230,LOC107597011 coding downstream 289187 13452956 ~ 13469076 (-)
depdc4 LOC108427048 coding downstream 325331 13423638 ~ 13432932 (-)
sfmbt2 sfmbt2 coding upstream 162536 13922539 ~ 13997493 (-)
kin kin coding upstream 320286 14080289 ~ 14089552 (-)
snd1 snd1,LOC107738807,LOC107732977 coding upstream 1510860 15270863 ~ 15554632 (-)
LOC103045938 LOC108432519 coding upstream 1818871 15578874 ~ 15624348 (-)
akap14 NA coding upstream 2165543 15925546 ~ 15927271 (-)
G63830 NA non-coding downstream 196169 13561359 ~ 13562094 (-)
G63773 NA non-coding downstream 214695 13542626 ~ 13543568 (-)
G63766 NA non-coding downstream 310464 13444767 ~ 13447799 (-)
G63704 NA non-coding downstream 412842 13345150 ~ 13345421 (-)
G63701 NA non-coding downstream 433388 13324556 ~ 13324875 (-)
G63852 rbm17,LOC107755150,LOC107748463 non-coding upstream 4761 13764764 ~ 13769051 (-)
G63904 NA non-coding upstream 231252 13991255 ~ 13991792 (-)
G63939 atp5c1,LOC107675979 non-coding upstream 330376 14090379 ~ 14093476 (-)
G63947 taf3,LOC107555823,LOC107748456,LOC107675973 non-coding upstream 431685 14191688 ~ 14196509 (-)
G63955 gata3 non-coding upstream 466262 14226265 ~ 14227320 (-)
LOC103025415 iqsec3,LOC107689235 other downstream 730765 12805971 ~ 13027498 (-)
slc2a13 LOC108427068,LOC108280145,LOC107689243 other downstream 1257600 12365468 ~ 12500663 (-)
G63516 NA other downstream 1377707 12320555 ~ 12380556 (-)
G63217 NA other downstream 3347032 10314799 ~ 10411231 (-)
G63104 LOC108425317,LOC107562148,LOC107741714,LOC107687569 other downstream 4135475 9618661 ~ 9622788 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other upstream 81190 13841193 ~ 13887868 (-)
G64034 NA other upstream 1025318 14785321 ~ 14786149 (-)
LOC111192906 NA other upstream 1230226 14990229 ~ 14992730 (-)
G64060 NA other upstream 1234161 14994164 ~ 14994832 (-)
LOC103027187 NA other upstream 1911303 15671306 ~ 15867795 (-)

Expression


Co-expression Network