Item | Value |
---|---|
gene id | G63939 |
gene name | atp5c1,LOC107675979 |
gene type | non-coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035903.1 |
NCBI id | CM008306.1 |
chromosome length | 40813162 |
location | 14090379 ~ 14093476 (-) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
atp5c1 | Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within ATP biosynthetic process and ion transport. Located in mitochondrial inner membrane and myelin sheath. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Orthologous to human ATP5F1C (ATP synthase F1 subunit gamma). |
description |
---|
PREDICTED: ATP synthase subunit gamma, mitochondrial isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU86283 | True | 517 | lncRNA | 0.52 | 4 | 14090379 | 14093476 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
kin | kin | coding | downstream | 827 | 14080289 ~ 14089552 (-) |
sfmbt2 | sfmbt2 | coding | downstream | 92886 | 13922539 ~ 13997493 (-) |
LOC103038708 | NA | coding | downstream | 334897 | 13712234 ~ 13755482 (-) |
LOC103026945 | LOC108427039 | coding | downstream | 397529 | 13646396 ~ 13692850 (-) |
vezt | vezt | coding | downstream | 583085 | 13474323 ~ 13507294 (-) |
snd1 | snd1,LOC107738807,LOC107732977 | coding | upstream | 1177387 | 15270863 ~ 15554632 (-) |
LOC103045938 | LOC108432519 | coding | upstream | 1485398 | 15578874 ~ 15624348 (-) |
akap14 | NA | coding | upstream | 1832070 | 15925546 ~ 15927271 (-) |
LOC111192960 | NA | coding | upstream | 2254083 | 16347559 ~ 16351713 (-) |
scaf11 | NA | coding | upstream | 2337824 | 16431300 ~ 16450766 (-) |
G63904 | NA | non-coding | downstream | 98587 | 13991255 ~ 13991792 (-) |
G63852 | rbm17,LOC107755150,LOC107748463 | non-coding | downstream | 321328 | 13764764 ~ 13769051 (-) |
G63849 | NA | non-coding | downstream | 330376 | 13758263 ~ 13760003 (-) |
G63830 | NA | non-coding | downstream | 528285 | 13561359 ~ 13562094 (-) |
G63773 | NA | non-coding | downstream | 546811 | 13542626 ~ 13543568 (-) |
G63947 | taf3,LOC107555823,LOC107748456,LOC107675973 | non-coding | upstream | 98212 | 14191688 ~ 14196509 (-) |
G63955 | gata3 | non-coding | upstream | 132789 | 14226265 ~ 14227320 (-) |
G63963 | NA | non-coding | upstream | 173929 | 14267405 ~ 14267758 (-) |
G63993 | NA | non-coding | upstream | 380549 | 14474025 ~ 14474408 (-) |
G63994 | NA | non-coding | upstream | 394717 | 14488193 ~ 14488804 (-) |
prkcq | prkcq,LOC107748461,LOC107675981,LOC107555829 | other | downstream | 202511 | 13841193 ~ 13887868 (-) |
LOC103025415 | iqsec3,LOC107689235 | other | downstream | 1062881 | 12805971 ~ 13027498 (-) |
slc2a13 | LOC108427068,LOC108280145,LOC107689243 | other | downstream | 1589716 | 12365468 ~ 12500663 (-) |
G63516 | NA | other | downstream | 1709823 | 12320555 ~ 12380556 (-) |
G63217 | NA | other | downstream | 3679148 | 10314799 ~ 10411231 (-) |
G64034 | NA | other | upstream | 691845 | 14785321 ~ 14786149 (-) |
LOC111192906 | NA | other | upstream | 896753 | 14990229 ~ 14992730 (-) |
G64060 | NA | other | upstream | 900688 | 14994164 ~ 14994832 (-) |
LOC103027187 | NA | other | upstream | 1577830 | 15671306 ~ 15867795 (-) |
G64387 | NA | other | upstream | 2491589 | 16585065 ~ 16585647 (-) |