G64064


Basic Information

Item Value
gene id G64064
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 15003669 ~ 15003877 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86477
AAGAGGACGCAGGTTAGTATGGTCCTGGCGCCTATGTGTGTTTTTACGCCTTCTGTACGTACCGGAGATGACAGGAATGTGATGGGAGCACATTTTGTGAGGCAGTAGGACGGGCTGCCTTGTCAGTGGCCTTGCTCGGTGgactcgcgcaggtagactcgcaggtctttacccgagTTAGGTCTTCACACGAGAGGGTCTTCACACAA

Function

GO:

id name namespace
GO:0016064 immunoglobulin mediated immune response biological_process
GO:0002250 adaptive immune response biological_process
GO:0002252 immune effector process biological_process
GO:0002253 activation of immune response biological_process
GO:0072376 protein activation cascade biological_process
GO:0006955 immune response biological_process
GO:0006956 complement activation biological_process
GO:0006958 complement activation, classical pathway biological_process
GO:0006959 humoral immune response biological_process
GO:0048583 regulation of response to stimulus biological_process
GO:0048584 positive regulation of response to stimulus biological_process
GO:0002376 immune system process biological_process
GO:0002682 regulation of immune system process biological_process
GO:0002684 positive regulation of immune system process biological_process
GO:0050776 regulation of immune response biological_process
GO:0050778 positive regulation of immune response biological_process
GO:0002443 leukocyte mediated immunity biological_process
GO:0002449 lymphocyte mediated immunity biological_process
GO:0002455 humoral immune response mediated by circulating immunoglobulin biological_process
GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains biological_process
GO:0019724 B cell mediated immunity biological_process

KEGG:

id description
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU86477 True 209 lncRNA 0.54 1 15003669 15003877

Neighbor

gene id symbol gene type direction distance location
kin kin coding downstream 914117 14080289 ~ 14089552 (-)
sfmbt2 sfmbt2 coding downstream 1006176 13922539 ~ 13997493 (-)
LOC103038708 NA coding downstream 1248187 13712234 ~ 13755482 (-)
LOC103026945 LOC108427039 coding downstream 1310819 13646396 ~ 13692850 (-)
vezt vezt coding downstream 1496375 13474323 ~ 13507294 (-)
snd1 snd1,LOC107738807,LOC107732977 coding upstream 266986 15270863 ~ 15554632 (-)
LOC103045938 LOC108432519 coding upstream 574997 15578874 ~ 15624348 (-)
akap14 NA coding upstream 921669 15925546 ~ 15927271 (-)
LOC111192960 NA coding upstream 1343682 16347559 ~ 16351713 (-)
scaf11 NA coding upstream 1427423 16431300 ~ 16450766 (-)
G64063 NA non-coding downstream 3644 14999809 ~ 15000025 (-)
G64054 NA non-coding downstream 23712 14979722 ~ 14979957 (-)
G64048 NA non-coding downstream 46262 14884012 ~ 14957407 (-)
G64043 NA non-coding downstream 123090 14880345 ~ 14880579 (-)
G64018 NA non-coding downstream 230505 14772875 ~ 14773164 (-)
G64085 NA non-coding upstream 54497 15058374 ~ 15059643 (-)
G64156 NA non-coding upstream 661299 15665176 ~ 15668027 (-)
LOC111192959 NA non-coding upstream 886545 15890422 ~ 15907327 (-)
G64214 NA non-coding upstream 957061 15960938 ~ 15961286 (-)
G64247 nrcam non-coding upstream 1096546 16100423 ~ 16105219 (-)
G64060 NA other downstream 8837 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 10939 14990229 ~ 14992730 (-)
G64034 NA other downstream 217520 14785321 ~ 14786149 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other downstream 1115801 13841193 ~ 13887868 (-)
LOC103025415 iqsec3,LOC107689235 other downstream 1976171 12805971 ~ 13027498 (-)
LOC103027187 NA other upstream 667429 15671306 ~ 15867795 (-)
G64387 NA other upstream 1581188 16585065 ~ 16585647 (-)
G64492 NA other upstream 1878458 16882335 ~ 16887903 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other upstream 2531419 17535296 ~ 17664561 (-)
LOC103043390 NA other upstream 2674937 17678814 ~ 17689312 (-)

Expression


Co-expression Network