G64085


Basic Information

Item Value
gene id G64085
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 15058374 ~ 15059643 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86502
atataccgtatttttcggactataaggcgcaccgtattataagacgcactatcaaagaaccttagatttccagatgtccactaaggcttgctgcaccagcgttagcatagctatccgctagctagtcacctaaactagtaaagttaacccaaacttaaacgacagcgttacactgagtaatcctgcgtgttctggtaagacagtgagatattagctagcgatttcgtcccccgtagcttgtttttaacacggtaaacaagcagattacaggctgataaaactcacctctgagagagttagcgcttagcatctagctaatgctagccaggcaaagcagcacagacttacaggccgataactcacctctgaacggtgaacgcttagcgattagcatctaactctaataatactgctccagcagtattaaaagtgctaaatttagaaaatactgatctctgaacagtgaaaagctagctagctaagcggttagcatctagctaatgctattgctgctctgcacggagtgtgtgtttactgctccttacacctgacgggtaaaatttagataatactgatctctgaacagtgaataagctagctaatgctatttgctgctccagcctcggagctgcacggctctggactctgtatagcactgaaactctgtataacgctgcacggagtgtgtgtttactgctccttacaacctgacgagtaaaatttagataatactgatctcagtgaataagctagctagcttagcggttagcatctagctaatgctattgctgctcagactcggagctgcacggctctggactctgtatagcactgaaactctctataacgctgcacggagtgtgtgtttactgctccttacaacctgacgagtaaaatccatacaaaaggcgcaccgtattataagacgcactgtcaatttttgtgaaaattaaaagtttttaagtgcgccttatagtccgaaaaatacggtaaatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86502 True 997 lncRNA 0.43 2 15058374 15059643

Neighbor

gene id symbol gene type direction distance location
kin kin coding downstream 968822 14080289 ~ 14089552 (-)
sfmbt2 sfmbt2 coding downstream 1060881 13922539 ~ 13997493 (-)
LOC103038708 NA coding downstream 1302892 13712234 ~ 13755482 (-)
LOC103026945 LOC108427039 coding downstream 1365524 13646396 ~ 13692850 (-)
vezt vezt coding downstream 1551080 13474323 ~ 13507294 (-)
snd1 snd1,LOC107738807,LOC107732977 coding upstream 211220 15270863 ~ 15554632 (-)
LOC103045938 LOC108432519 coding upstream 519231 15578874 ~ 15624348 (-)
akap14 NA coding upstream 865903 15925546 ~ 15927271 (-)
LOC111192960 NA coding upstream 1287916 16347559 ~ 16351713 (-)
scaf11 NA coding upstream 1371657 16431300 ~ 16450766 (-)
G64064 NA non-coding downstream 54497 15003669 ~ 15003877 (-)
G64063 NA non-coding downstream 58349 14999809 ~ 15000025 (-)
G64054 NA non-coding downstream 78417 14979722 ~ 14979957 (-)
G64048 NA non-coding downstream 100967 14884012 ~ 14957407 (-)
G64043 NA non-coding downstream 177795 14880345 ~ 14880579 (-)
G64156 NA non-coding upstream 605533 15665176 ~ 15668027 (-)
LOC111192959 NA non-coding upstream 830779 15890422 ~ 15907327 (-)
G64214 NA non-coding upstream 901295 15960938 ~ 15961286 (-)
G64247 nrcam non-coding upstream 1040780 16100423 ~ 16105219 (-)
G64273 NA non-coding upstream 1081013 16140656 ~ 16141428 (-)
G64060 NA other downstream 63542 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 65644 14990229 ~ 14992730 (-)
G64034 NA other downstream 272225 14785321 ~ 14786149 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other downstream 1170506 13841193 ~ 13887868 (-)
LOC103025415 iqsec3,LOC107689235 other downstream 2030876 12805971 ~ 13027498 (-)
LOC103027187 NA other upstream 611663 15671306 ~ 15867795 (-)
G64387 NA other upstream 1525422 16585065 ~ 16585647 (-)
G64492 NA other upstream 1822692 16882335 ~ 16887903 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other upstream 2475653 17535296 ~ 17664561 (-)
LOC103043390 NA other upstream 2619171 17678814 ~ 17689312 (-)

Expression


Co-expression Network