G64088


Basic Information

Item Value
gene id G64088
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 15090971 ~ 15091193 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86509
ctagaaatgcgcactctctccgcttttagactctttggcctgtttttctgcgctagaaatacgcaccctctccgcttttagactctttggcctgtttttctgcgctagaaatgcgcactctctccgcttttagactctttggcacgtttctgacacctagcgttcaaactttgaatctcacattataaaaacctgcttaacagcgggccaactttcattctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86509 True 223 lncRNA 0.45 1 15090971 15091193

Neighbor

gene id symbol gene type direction distance location
fam200b NA coding upstream 90389 14997118 ~ 15000582 (+)
LOC111192957 NA coding upstream 363616 14721032 ~ 14727355 (+)
taf3 taf3,LOC107748456,LOC107555823,LOC107675973 coding upstream 894425 14102939 ~ 14196546 (+)
atp5c1 atp5c1,LOC107728502,LOC107748457 coding upstream 992425 14090332 ~ 14098546 (+)
itih2 itih2,LOC107748478,LOC107666937 coding upstream 1009858 14056785 ~ 14081113 (+)
LOC103045633 lrrc4.1,LOC108432552,LOC107699068,LOC107557314,LOC107732976,LOC105904105 coding downstream 330808 15422001 ~ 15426787 (+)
LOC111192874 NA coding downstream 472824 15564017 ~ 15571205 (+)
ccdc87 NA coding downstream 813149 15904342 ~ 15923062 (+)
LOC103046551 LOC108432559 coding downstream 832533 15923726 ~ 15953932 (+)
LOC103027800 LOC108432561 coding downstream 907008 15998201 ~ 16101524 (+)
G64086 NA non-coding upstream 18172 15072539 ~ 15072799 (+)
G64083 NA non-coding upstream 33580 15057131 ~ 15057391 (+)
G64067 NA non-coding upstream 55135 15005012 ~ 15035836 (+)
G64057 NA non-coding upstream 98963 14991203 ~ 14992008 (+)
G64047 NA non-coding upstream 132703 14952735 ~ 14958268 (+)
G64091 NA non-coding downstream 31818 15123011 ~ 15123221 (+)
G64087 NA non-coding downstream 55833 15147026 ~ 15189969 (+)
G64141 NA non-coding downstream 535383 15626576 ~ 15629978 (+)
G64144 NA non-coding downstream 573975 15665168 ~ 15672932 (+)
G64159 NA non-coding downstream 653888 15745081 ~ 15749573 (+)
G64015 NA other upstream 345889 14744735 ~ 14745082 (+)
gata3 gata3,LOC107555822 other upstream 848737 14167229 ~ 14242234 (+)
LOC111192955 NA other upstream 1929604 13156226 ~ 13161367 (+)
G63432 NA other upstream 2622069 12468050 ~ 12468902 (+)
G63051 NA other upstream 5440884 9646579 ~ 9650087 (+)
arid2 arid2,LOC107707985,LOC107555896 other downstream 1304133 16395326 ~ 16426623 (+)
G64289 NA other downstream 1348027 16439220 ~ 16442449 (+)
G64431 NA other downstream 1661850 16753043 ~ 16753560 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other downstream 1742097 16833290 ~ 16888195 (+)
G64449 NA other downstream 1781894 16873087 ~ 16875941 (+)

Expression


Co-expression Network