G64156


Basic Information

Item Value
gene id G64156
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 15665176 ~ 15668027 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86593
ttattatttattgtaggCATCTTCCAGactatgattatgattatgtaGGATTCCTGCAGTTGTCAGTTATTACAGTGCCAGAGAGTGACACATCAGGATTGCATAGAAATGTGTGTCTTTACCTGTATCAGTGTTGTATGTTGATCACTGTATGATAAAGCTCTTCAGATCCGACGTCTACTAGAGCTCAGAAATAGTAAGTGCCAtaaactctctctttttctctctctctctctcttgctatctctctcaatctttctctctttaaaacaaagaaacctTTATGAACTTGTTATGATAAAGTAAAACCTTTAAATGCAAACCTCTTCAGACTTCAGATATCTTTTGATATATGCCCTTGCCTGTCTGCATGTATTTTGTTGGCAGGGAgaatactaaactaaactgtgtgtgtgtgtgtgtgcctgtgcaCGCTTTAACCATGGTTAGTGTGATGTTGGGATGTTTACTGCTGTTGGTGTTTGACAATGTTAAATGATTTGGGTCTTGATTTCACTGCCTTTCTCTTGTGGAGACAGCATTTGATTAGGACCCATCTGTAGATAACGCTTCAGTGCATACAGTCAACCATACCTGTTTAAAAAACATCTATCTAACAGTAGTTTACCAAGCCTCAAAGCTTAAACATCTAATAACCAAAGAACGGTTCACCAATTTTTAAGCTGAAATGTTTAGTAAACTAAGAATAGTCCAATAACTAGCTGGTCAAACATCTAGTGAACAGGGAACACTACACCACGCTTCTAAGATCAAACATCTAAAAACCTAGGAACAGTTTACCAAGTTTTTAAGATACATCTAATAAcccagggttcttgcaccatttcaagtcaaattaaatgtgttttaagacatttttagaccacaataaatataatttaagacccaaaatgtagtcataatttctttggtAGAAAACAATGTgttgtattggaaatcaaaacctaatgtagctaacttgccactaatgttactatgttatctagcccactgctaatgttagctagctttatgctaaccttagttctttccccGGTATCGTAGCTAACTCGCCACAAATGTTATTTtgatagcatgttagctagctcgccactaacgttagctagctctccattaaCCTTAGTTCCCTTtctggtaacgttagcttactcaccgctaaagttagcatgtGCCCTTTCCACTGGCATTAAGTGCacagtctgaaaatgtaatacctacagctaatttacagtaaatttaagacaatttaagatcTTAATTATCCAAATTAAAATTTAAGACAAGAAAAGGACCTGCAGGAACCCTGTAACCTAAGAACAGTTTACCAAGTTTCTAAGCTCATACATCTAATAACCTAGGAACAGTTTACCATAGTTTTAAGCTTTTAGTAACAAGCATTACTAAATAACTAAGTAACAAGTATGTTCATCCAAACATCTATTAAACATAGAACAGTCTATTAAGCTTGTCTGTCCAAatatctattaaatatagtaaCAGTCCACCAAGCTGCTAAGATCAAACATCTAATAACCAAGGTACAGTTTACAACATTTCTAAGCTCATACATCTAATAGAGAAACCAGTGCACTAAGCTTTATAAGCTCAAAACTTCCTTTAATATATGAACAGTTTACTAAGCTTCTACGATCAAATACCTAACAACCTTGGAGgagtttaaattaatttaagataAAACTTCCAATTGGCCCAGAATAGTTTACCAGATTTCTAAGATCAAACGGCTAAGAACCTAGGAACAGTTCACCAAGCTTCTAAGCTCAAACATTTCAGAATCTACAAAAGTTGAAGGTTCAAGCATCTAGTAAACTAGGAACAGTTGAGAAGCTTATAAACTTAAACATCTATTGGATTATAGAGTGTTCACTCAGCTTCTAAACTCAAACATCTtaggaacaggaaaaaaaaaaaagatcaaacatCAAATGACCTAGGAACAGTTCACCAAATTCCCAAGCTCAAACATCTAGTAGCTTGGGAACAGTTTAATAAATGTCAAAGATCAAACATTTGATAGCCTAGGAACAGTTCACTTTTTAGATTCTGAGCTTAAACATTTAGAAACCTAGAGGAAATCTACCAGGTTTGAAGGTTCAAAACAAGGAACAGTACACTAAGCTTGCAGCTTGCTTGGTTGTCAGCTGCCAGAACTGATGAGAGCCATAGAAAATGAATCATTTTATATAGGATATAGTGTGAAGGTGATGTACAGTACTTAACATTTAGACCATTAGATGCTGTCAAAATTGGTAGAGGTCAAAAGATGAAGTTTACCGCTGATGTGTCACAATCATATGCTGTCTCCTAAGAACAGAAAACTTACGAGATGCTACTGAAAGTGAACTCAATGCTGATGGTTTTGGTGCTGTCTATCTCTGGGTTTGTTCTTCCTGAATTTCTCTCTAAAGATTCTATTTTTTTGGTGGATTGTTCCACTCTGATCCTGGCTGGCATCTCTGCTAGTCATCCTATGCCAGTTGCCCAAAGGCAGATTATTAGCCAGTCTCTCCATTAACCTTTCTTGACTGGTCTCCGCAGGCTCGGTTATTGGTAGGGTTCTGGTCCTTCTCTGTGCTTTTTAATACTTTACTCTTTTCTGGGTATTTGGTTTGCCTGAATCAAACTGTGTGTACATTTGTATGATAATGTTATAAAAACAATGGAACTATTTATACTCCCAGAGATGTGTCGATTCATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86593 True 2741 lncRNA 0.36 2 15665176 15668027

Neighbor

gene id symbol gene type direction distance location
LOC103045938 LOC108432519 coding downstream 40828 15578874 ~ 15624348 (-)
snd1 snd1,LOC107738807,LOC107732977 coding downstream 110544 15270863 ~ 15554632 (-)
kin kin coding downstream 1575624 14080289 ~ 14089552 (-)
sfmbt2 sfmbt2 coding downstream 1667683 13922539 ~ 13997493 (-)
LOC103038708 NA coding downstream 1909694 13712234 ~ 13755482 (-)
akap14 NA coding upstream 257519 15925546 ~ 15927271 (-)
LOC111192960 NA coding upstream 679532 16347559 ~ 16351713 (-)
scaf11 NA coding upstream 763273 16431300 ~ 16450766 (-)
slc38a2 slc38a2,s38a2,LOC103028401,LOC106609517,LOC108274720 coding upstream 791713 16459740 ~ 16469357 (-)
LOC103027662 LOC108411501,LOC108275084,LOC107658982 coding upstream 861178 16529205 ~ 16577816 (-)
G64085 NA non-coding downstream 605533 15058374 ~ 15059643 (-)
G64064 NA non-coding downstream 661299 15003669 ~ 15003877 (-)
G64063 NA non-coding downstream 665151 14999809 ~ 15000025 (-)
G64054 NA non-coding downstream 685219 14979722 ~ 14979957 (-)
G64048 NA non-coding downstream 707769 14884012 ~ 14957407 (-)
LOC111192959 NA non-coding upstream 222395 15890422 ~ 15907327 (-)
G64214 NA non-coding upstream 292911 15960938 ~ 15961286 (-)
G64247 nrcam non-coding upstream 432396 16100423 ~ 16105219 (-)
G64273 NA non-coding upstream 472629 16140656 ~ 16141428 (-)
G64280 NA non-coding upstream 499036 16167063 ~ 16167373 (-)
G64060 NA other downstream 670344 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 672446 14990229 ~ 14992730 (-)
G64034 NA other downstream 879027 14785321 ~ 14786149 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other downstream 1777308 13841193 ~ 13887868 (-)
LOC103025415 iqsec3,LOC107689235 other downstream 2637678 12805971 ~ 13027498 (-)
LOC103027187 NA other upstream 3279 15671306 ~ 15867795 (-)
G64387 NA other upstream 917038 16585065 ~ 16585647 (-)
G64492 NA other upstream 1214308 16882335 ~ 16887903 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other upstream 1867269 17535296 ~ 17664561 (-)
LOC103043390 NA other upstream 2010787 17678814 ~ 17689312 (-)

Expression


Co-expression Network