G64273


Basic Information

Item Value
gene id G64273
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 16140656 ~ 16141428 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86744
AGGAAATCTAGCAGCAGACACTTTCCCAATTTCTTTCGTTCTGAATACAAACTTTAATGAGGAGCTTTATACAGGTTGTGCTGCATGGATTTTAATACATCATCTTATTTAAGTGTGACATGAAGAAAATTGCACTTTCAAAACTAGAACTGCATGGACAAAAGTGTGATGTGGTGAGTAGCATAGTCTCTAATGTGTAGTCTACCTAGCAGCATGTGCAGCCAAAAATATAGCATCTGTGTTCACACAATGTCAAGGTATCTGAACTAGAGCCAATTACCTAATAGAGGAAAACCTTTACTCCCTGCAATTACCTTGCATTTACACATTCTtataagaaaaacagaaaactacAACTTAAATGGCTGTTTAAGCAGCTAAAGCATTGACGACAGGGTAAAGTTCTTTACATTTCCATAAAGTTCTTTAAATTTCCATGTTGAAGAATATATCATCATCTCAAACCTGTAAGCCTGTAAAGAATTTGAGGTGAATGGTGGATGAAATTTCATAAGGCGAACCAAACAAATCGCACCTCCATTTGCAGAACAGTGGGGTAGTGGTTTTAGATTATACAGTCCATTTGACCCAGGTGGGTAAAGAATGGCCTCACTACAGGCCAAGGTTCATCCAGGacaacaccagcagcagcagagagacaGCACAGAGAGACTGAGGGCCCAATGCAGCTCGACCTGTTAACACACCACAACAGATAACAGAGCAGGCCACTCAGTCAGGTTAATGTAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86744 True 751 lncRNA 0.40 2 16140656 16141428

Neighbor

gene id symbol gene type direction distance location
akap14 NA coding downstream 213385 15925546 ~ 15927271 (-)
LOC103045938 LOC108432519 coding downstream 516308 15578874 ~ 15624348 (-)
snd1 snd1,LOC107738807,LOC107732977 coding downstream 586024 15270863 ~ 15554632 (-)
kin kin coding downstream 2051104 14080289 ~ 14089552 (-)
sfmbt2 sfmbt2 coding downstream 2143163 13922539 ~ 13997493 (-)
LOC111192960 NA coding upstream 206131 16347559 ~ 16351713 (-)
scaf11 NA coding upstream 289872 16431300 ~ 16450766 (-)
slc38a2 slc38a2,s38a2,LOC103028401,LOC106609517,LOC108274720 coding upstream 318312 16459740 ~ 16469357 (-)
LOC103027662 LOC108411501,LOC108275084,LOC107658982 coding upstream 387777 16529205 ~ 16577816 (-)
LOC103027149 LOC103027149 coding upstream 512685 16654113 ~ 16660507 (-)
G64247 nrcam non-coding downstream 35437 16100423 ~ 16105219 (-)
G64214 NA non-coding downstream 179370 15960938 ~ 15961286 (-)
LOC111192959 NA non-coding downstream 233329 15890422 ~ 15907327 (-)
G64156 NA non-coding downstream 472629 15665176 ~ 15668027 (-)
G64085 NA non-coding downstream 1081013 15058374 ~ 15059643 (-)
G64280 NA non-coding upstream 25635 16167063 ~ 16167373 (-)
G64313 NA non-coding upstream 35085 16176513 ~ 16180454 (-)
G64320 pdzrn4,LOC107757222,LOC107581937,LOC107694264,LOC107725536,LOC107587183 non-coding upstream 152290 16293718 ~ 16293968 (-)
G64321 NA non-coding upstream 170703 16312131 ~ 16368390 (-)
G64380 NA non-coding upstream 348081 16489509 ~ 16489931 (-)
LOC103027187 NA other downstream 272861 15671306 ~ 15867795 (-)
G64060 NA other downstream 1145824 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 1147926 14990229 ~ 14992730 (-)
G64034 NA other downstream 1354507 14785321 ~ 14786149 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other downstream 2252788 13841193 ~ 13887868 (-)
G64387 NA other upstream 443637 16585065 ~ 16585647 (-)
G64492 NA other upstream 740907 16882335 ~ 16887903 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other upstream 1393868 17535296 ~ 17664561 (-)
LOC103043390 NA other upstream 1537386 17678814 ~ 17689312 (-)
G64886 NA other upstream 1787079 17928507 ~ 17931170 (-)

Expression


Co-expression Network