G64380


Basic Information

Item Value
gene id G64380
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 16489509 ~ 16489931 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86877
ctccacaggaccaaagaaaattactaagacatgtaatactgaaaaaaacccggaaaaaacaaatacacgtctggggataaaaattaaacaaaccaaaccacgctcaaagaaataaatgtatatataaacaaaacaaaagaatggacaaaaacaacaatccgttaaaaaaactcatttaaatccattaaaaaactcatttaaaacaatcacaggctttttgcgcagaataataaaagtttcggttagtttcagtttcaaatcatgaaaacagctcaccaaaacctcaacctatcctttatatttgacaatatttgattaacttacaggtccttacttatttttatttaactgaactgagttgtaaattatttatagcctcgcgctgaattcagctccgcgctgcgaaagagagagagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86877 True 423 lncRNA 0.32 1 16489509 16489931

Neighbor

gene id symbol gene type direction distance location
slc38a2 slc38a2,s38a2,LOC103028401,LOC106609517,LOC108274720 coding downstream 20152 16459740 ~ 16469357 (-)
scaf11 NA coding downstream 38743 16431300 ~ 16450766 (-)
LOC111192960 NA coding downstream 137796 16347559 ~ 16351713 (-)
akap14 NA coding downstream 562238 15925546 ~ 15927271 (-)
LOC103045938 LOC108432519 coding downstream 865161 15578874 ~ 15624348 (-)
LOC103027662 LOC108411501,LOC108275084,LOC107658982 coding upstream 39274 16529205 ~ 16577816 (-)
LOC103027149 LOC103027149 coding upstream 164182 16654113 ~ 16660507 (-)
LOC111192875 LOC108437882 coding upstream 206150 16696081 ~ 16707075 (-)
LOC103039070 NA coding upstream 405649 16895580 ~ 16945665 (-)
LOC103042974 LOC108437161 coding upstream 555583 17045514 ~ 17096825 (-)
G64321 NA non-coding downstream 121119 16312131 ~ 16368390 (-)
G64320 pdzrn4,LOC107757222,LOC107581937,LOC107694264,LOC107725536,LOC107587183 non-coding downstream 195541 16293718 ~ 16293968 (-)
G64313 NA non-coding downstream 309055 16176513 ~ 16180454 (-)
G64280 NA non-coding downstream 322136 16167063 ~ 16167373 (-)
G64273 NA non-coding downstream 348081 16140656 ~ 16141428 (-)
G64382 NA non-coding upstream 19005 16508936 ~ 16514868 (-)
G64418 zmp:0000000711,LOC108411497 non-coding upstream 156247 16646178 ~ 16648622 (-)
G64422 NA non-coding upstream 175090 16665021 ~ 16667239 (-)
LOC111192962 NA non-coding upstream 222142 16712073 ~ 16714049 (-)
G64479 NA non-coding upstream 273279 16763210 ~ 16766262 (-)
LOC103027187 NA other downstream 621714 15671306 ~ 15867795 (-)
G64060 NA other downstream 1494677 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 1496779 14990229 ~ 14992730 (-)
G64034 NA other downstream 1703360 14785321 ~ 14786149 (-)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 other downstream 2601641 13841193 ~ 13887868 (-)
G64387 NA other upstream 95134 16585065 ~ 16585647 (-)
G64492 NA other upstream 392404 16882335 ~ 16887903 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other upstream 1045365 17535296 ~ 17664561 (-)
LOC103043390 NA other upstream 1188883 17678814 ~ 17689312 (-)
G64886 NA other upstream 1438576 17928507 ~ 17931170 (-)

Expression


Co-expression Network