G64393


Basic Information

Item Value
gene id G64393
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 16608857 ~ 16609213 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU86895
GTGCGTCGAATGAAACGgttttaataagcagttaaagtttctataatttttttctgcctgAAATTATTTCAAGCTCTGAGTGGATATAAATGGGGAttataggagactggattgGCGGATTCTCTTACGTGTGGActcgttttgaaggtaagagcgtGGGGGATGCGCtggtgggggttggggggggggtggtgtgcGGTGTGTCCTGAGGTAACCCCAGGACGAAACCCGAGCAGATTTTAACTGTAAACACGCGCTCCGACGCGCTCTTTCAGCTTTAATTCAAAAAccgtacatcctacagtaaaacggAGCACAGTTCCGGAATCCGGAGAgacagacggttcgaatggtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86895 True 357 lncRNA 0.48 1 16608857 16609213

Neighbor

gene id symbol gene type direction distance location
LOC103047366 LOC108415391 coding upstream 293858 16218828 ~ 16314999 (+)
LOC103046856 LOC108432562,LOC108279529,LOC107757284,LOC107581848 coding upstream 467458 16112859 ~ 16141399 (+)
LOC103027800 LOC108432561 coding upstream 507333 15998201 ~ 16101524 (+)
LOC103046551 LOC108432559 coding upstream 654925 15923726 ~ 15953932 (+)
ccdc87 NA coding upstream 685795 15904342 ~ 15923062 (+)
LOC103026270 zmp:0000000711,LOC108411497,LOC108275404 coding downstream 6358 16615571 ~ 16651658 (+)
LOC103042039 ern1,LOC102793659 coding downstream 107839 16717052 ~ 16764567 (+)
LOC103041732 NA coding downstream 159197 16768410 ~ 16779685 (+)
LOC103035087 mafga,LOC107739593,LOC107556599,LOC107729585,LOC107701907 coding downstream 174700 16783913 ~ 16811230 (+)
LOC111192909 si:ch73-374l24.1,LOC108437159,LOC108259727,LOC107556610,LOC107698783 coding downstream 699852 17309065 ~ 17556553 (+)
G64362 NA non-coding upstream 76074 16491186 ~ 16532783 (+)
G64291 NA non-coding upstream 176445 16377660 ~ 16432412 (+)
G64292 NA non-coding upstream 240463 16360903 ~ 16368394 (+)
G64279 NA non-coding upstream 441479 16167064 ~ 16167378 (+)
G64237 NA non-coding upstream 458883 16149768 ~ 16149974 (+)
G64403 NA non-coding downstream 86727 16695940 ~ 16707096 (+)
G64427 NA non-coding downstream 117819 16727032 ~ 16782114 (+)
G64462 NA non-coding downstream 288337 16897550 ~ 16904677 (+)
G64509 NA non-coding downstream 343368 16952581 ~ 16952839 (+)
G64511 NA non-coding downstream 360323 16969536 ~ 16969896 (+)
G64289 NA other upstream 166408 16439220 ~ 16442449 (+)
arid2 arid2,LOC107707985,LOC107555896 other upstream 182234 16395326 ~ 16426623 (+)
G64015 NA other upstream 1863775 14744735 ~ 14745082 (+)
gata3 gata3,LOC107555822 other upstream 2366623 14167229 ~ 14242234 (+)
LOC111192955 NA other upstream 3447490 13156226 ~ 13161367 (+)
G64431 NA other downstream 143830 16753043 ~ 16753560 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other downstream 224077 16833290 ~ 16888195 (+)
G64449 NA other downstream 263874 16873087 ~ 16875941 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other downstream 1080996 17690209 ~ 17719912 (+)
G64990 si:dkey-282h22.5,LOC108261121 other downstream 1946915 18556128 ~ 18623499 (+)

Expression


Co-expression Network