G64579


Basic Information

Item Value
gene id G64579
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17565712 ~ 17622672 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87142
catgttctcctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgcaaaaattcaagcagttcagtttggtggtttgatggtttgtgatcatccatcttcctcttgattatattccagaggtttttaatttggtaaaattaaaaaagaaaatcatcatttttaagtgatttcttatttttttacagagctgtatgtatgtataagtGTTACCGAACTTCTTTACATATGAATTTACAATTGGCGTTTTTATTCACGTGCCAAAATGTACAGAGAACTGTGGACTAATCAGAACTATttagaagctccgcccactcatGCAGTTATGAatgaattatattataaaatatgatgcattaatgcagaaaaatacaTAGAGACCTTAGAGAAACACATGTTGCTTTTAAGAtgctttaagatattttaagacAAATCACGAAATCATTTGTTTCGTTATTTtaaacaagacaatgctaaaccacatgctgcacaatTGAATCGCATTAATAAACGCATTATttgcattaataaaaacatttgtctACAATTAAGCTTAGTATACTTACTgcaattatgttaattaatttaaatccaATTTTTACGTTCTACCACGCAAGAGTTTCTAGGATGTAATGCGGAAAAAAAAcgtaagtgggcggagcttaaccaggtcttgcttttttttttttttttttttttttttgttttttttt

Function

GO:

id name namespace
GO:0051234 establishment of localization biological_process
GO:0006810 transport biological_process
GO:0006811 ion transport biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU87142 True 734 lncRNA 0.31 2 17565712 17622672

Neighbor

gene id symbol gene type direction distance location
LOC111192909 si:ch73-374l24.1,LOC108437159,LOC108259727,LOC107556610,LOC107698783 coding upstream 9159 17309065 ~ 17556553 (+)
LOC103035087 mafga,LOC107739593,LOC107556599,LOC107729585,LOC107701907 coding upstream 754482 16783913 ~ 16811230 (+)
LOC103041732 NA coding upstream 786027 16768410 ~ 16779685 (+)
LOC103042039 ern1,LOC102793659 coding upstream 801145 16717052 ~ 16764567 (+)
LOC103026270 zmp:0000000711,LOC108411497,LOC108275404 coding upstream 914054 16615571 ~ 16651658 (+)
LOC111192975 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding downstream 67534 17690206 ~ 17702915 (+)
LOC111192980 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding downstream 85298 17707970 ~ 17719858 (+)
LOC107197389 NA coding downstream 109422 17732094 ~ 17745773 (+)
LOC111192970 LOC108437139 coding downstream 125956 17748628 ~ 17764121 (+)
LOC111192968 NA coding downstream 146256 17768928 ~ 17780592 (+)
G64580 NA non-coding upstream 255 17562563 ~ 17565457 (+)
G64574 NA non-coding upstream 35419 17529946 ~ 17530293 (+)
G64560 NA non-coding upstream 119490 17445757 ~ 17446222 (+)
G64555 NA non-coding upstream 140566 17424503 ~ 17425146 (+)
G64550 NA non-coding upstream 232892 17331050 ~ 17332820 (+)
G64586 NA non-coding downstream 189 17622861 ~ 17674161 (+)
G64595 NA non-coding downstream 55256 17677928 ~ 17678442 (+)
G64710 NA non-coding downstream 146575 17769247 ~ 17815728 (+)
G64709 NA non-coding downstream 158010 17780682 ~ 17815649 (+)
G64753 NA non-coding downstream 334941 17957613 ~ 18008671 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other upstream 677517 16833290 ~ 16888195 (+)
G64449 NA other upstream 689771 16873087 ~ 16875941 (+)
G64431 NA other upstream 812152 16753043 ~ 16753560 (+)
G64289 NA other upstream 1123263 16439220 ~ 16442449 (+)
arid2 arid2,LOC107707985,LOC107555896 other upstream 1139089 16395326 ~ 16426623 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other downstream 67537 17690209 ~ 17719912 (+)
G64990 si:dkey-282h22.5,LOC108261121 other downstream 933456 18556128 ~ 18623499 (+)
LOC103045528 NA other downstream 1600537 19223209 ~ 19278071 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other downstream 1654130 19276802 ~ 19279517 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other downstream 1657620 19280292 ~ 19340879 (+)

Expression


Co-expression Network