G64586


Basic Information

Item Value
gene id G64586
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17622861 ~ 17674161 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87161
cataaagttatccaaaagcagtgtgtaagactggtggaggaggagaacatgatgccaagatgcataaaaactgtgattaaaaaacagggttattccaccaaatattgatttctgaactcttaaaactttatgaatatgaacttgttttcttcgcattatttgaggtctgaaagttctgcatcttttttgttatttcagtcatttctcatttcctgcaaataaatgctctaaatgacgatattttaatatttttatttgtaatttgggagaaatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87161 True 276 lncRNA 0.31 2 17622861 17674161

Neighbor

gene id symbol gene type direction distance location
LOC111192910 cacng5b,LOC108437158,LOC107556612,LOC107698772,LOC107729207,LOC107664435 coding upstream 40733 17568799 ~ 17582128 (+)
LOC111192909 si:ch73-374l24.1,LOC108437159,LOC108259727,LOC107556610,LOC107698783 coding upstream 66308 17309065 ~ 17556553 (+)
LOC103035087 mafga,LOC107739593,LOC107556599,LOC107729585,LOC107701907 coding upstream 811631 16783913 ~ 16811230 (+)
LOC103041732 NA coding upstream 843176 16768410 ~ 16779685 (+)
LOC103042039 ern1,LOC102793659 coding upstream 858294 16717052 ~ 16764567 (+)
LOC111192975 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding downstream 16045 17690206 ~ 17702915 (+)
LOC111192980 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding downstream 33809 17707970 ~ 17719858 (+)
LOC107197389 NA coding downstream 57933 17732094 ~ 17745773 (+)
LOC111192970 LOC108437139 coding downstream 74467 17748628 ~ 17764121 (+)
LOC111192968 NA coding downstream 94767 17768928 ~ 17780592 (+)
G64579 NA non-coding upstream 189 17565712 ~ 17622672 (+)
G64583 NA non-coding upstream 26732 17588922 ~ 17596129 (+)
G64580 NA non-coding upstream 57404 17562563 ~ 17565457 (+)
G64574 NA non-coding upstream 92568 17529946 ~ 17530293 (+)
G64560 NA non-coding upstream 176639 17445757 ~ 17446222 (+)
G64595 NA non-coding downstream 3767 17677928 ~ 17678442 (+)
G64710 NA non-coding downstream 95086 17769247 ~ 17815728 (+)
G64709 NA non-coding downstream 106521 17780682 ~ 17815649 (+)
G64753 NA non-coding downstream 283452 17957613 ~ 18008671 (+)
G64754 NA non-coding downstream 298418 17972579 ~ 18061330 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other upstream 734666 16833290 ~ 16888195 (+)
G64449 NA other upstream 746920 16873087 ~ 16875941 (+)
G64431 NA other upstream 869301 16753043 ~ 16753560 (+)
G64289 NA other upstream 1180412 16439220 ~ 16442449 (+)
arid2 arid2,LOC107707985,LOC107555896 other upstream 1196238 16395326 ~ 16426623 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other downstream 16048 17690209 ~ 17719912 (+)
G64990 si:dkey-282h22.5,LOC108261121 other downstream 881967 18556128 ~ 18623499 (+)
LOC103045528 NA other downstream 1549048 19223209 ~ 19278071 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other downstream 1602641 19276802 ~ 19279517 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other downstream 1606131 19280292 ~ 19340879 (+)

Expression


Co-expression Network