G64595


Basic Information

Item Value
gene id G64595
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17677928 ~ 17678442 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87170
tagatagatagatagtgacaaaacattaataaaaaaacattaaaagagaaatggtgtgtccaaacttttgactggtgctgtataatattaaaattttaatttgcaGTTGCAGGAGAGATTGGCCTTATTACAATTAATCGACACAATCAAttaacactcaaataacacccAATTAACGGTCTCTACCTTAAAAAGTGTCCAAACAcaacatatttcatatttattcaataaataaatatcagaaaCTTAAACATAGGGATGCACGTAGATATAGatattatatctgtatataccgatatcattttttttttatcagaatcaTCGGCATTGGTCATTTTGGACAATATTTAAAACCAATAtttgttgatatttttttttttgtatgccaGAAAAGGTGCCAAGCGACGCTGACCACGCTACTACAATAGGTCAACACTGTCTGCACTGATTTAAAATCAAATGattcaaattaattttatttattttcatattttttcagtatatattttgtaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87170 True 515 lncRNA 0.28 1 17677928 17678442

Neighbor

gene id symbol gene type direction distance location
LOC111192910 cacng5b,LOC108437158,LOC107556612,LOC107698772,LOC107729207,LOC107664435 coding upstream 95800 17568799 ~ 17582128 (+)
LOC111192909 si:ch73-374l24.1,LOC108437159,LOC108259727,LOC107556610,LOC107698783 coding upstream 121375 17309065 ~ 17556553 (+)
LOC103035087 mafga,LOC107739593,LOC107556599,LOC107729585,LOC107701907 coding upstream 866698 16783913 ~ 16811230 (+)
LOC103041732 NA coding upstream 898243 16768410 ~ 16779685 (+)
LOC103042039 ern1,LOC102793659 coding upstream 913361 16717052 ~ 16764567 (+)
LOC111192975 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding downstream 11764 17690206 ~ 17702915 (+)
LOC111192980 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 coding downstream 29528 17707970 ~ 17719858 (+)
LOC107197389 NA coding downstream 53652 17732094 ~ 17745773 (+)
LOC111192970 LOC108437139 coding downstream 70186 17748628 ~ 17764121 (+)
LOC111192968 NA coding downstream 90486 17768928 ~ 17780592 (+)
G64586 NA non-coding upstream 3767 17622861 ~ 17674161 (+)
G64579 NA non-coding upstream 55256 17565712 ~ 17622672 (+)
G64583 NA non-coding upstream 81799 17588922 ~ 17596129 (+)
G64580 NA non-coding upstream 112471 17562563 ~ 17565457 (+)
G64574 NA non-coding upstream 147635 17529946 ~ 17530293 (+)
G64710 NA non-coding downstream 90805 17769247 ~ 17815728 (+)
G64709 NA non-coding downstream 102240 17780682 ~ 17815649 (+)
G64753 NA non-coding downstream 279171 17957613 ~ 18008671 (+)
G64754 NA non-coding downstream 294137 17972579 ~ 18061330 (+)
G64760 NA non-coding downstream 320933 17999375 ~ 18000064 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other upstream 789733 16833290 ~ 16888195 (+)
G64449 NA other upstream 801987 16873087 ~ 16875941 (+)
G64431 NA other upstream 924368 16753043 ~ 16753560 (+)
G64289 NA other upstream 1235479 16439220 ~ 16442449 (+)
arid2 arid2,LOC107707985,LOC107555896 other upstream 1251305 16395326 ~ 16426623 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other downstream 11767 17690209 ~ 17719912 (+)
G64990 si:dkey-282h22.5,LOC108261121 other downstream 877686 18556128 ~ 18623499 (+)
LOC103045528 NA other downstream 1544767 19223209 ~ 19278071 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other downstream 1598360 19276802 ~ 19279517 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other downstream 1601850 19280292 ~ 19340879 (+)

Expression


Co-expression Network