G64688


Basic Information

Item Value
gene id G64688
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17606894 ~ 17670417 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87306
gtttttttcatacgtcctctgagaaaattacaggctgaattatctactgtttttctctgaactccgtgctcctccggtaattttagtcccgtccggacgcacatctctgagtttcgtctcctcgcctttaataaaatagctatttgtccactgccgcgcaccgtaattaagTTTTGGCCTcgcatttccacagagatccacgttaaaaacacaaaagcgagtggaaatggaggagctactgaactctactgatgatgtcacgtgaccgagaaaagtagcctaaaaactcactgatcctcctgtttttacaatttgtagtccggatgcaggactgagtagaagtgtgagatattttttacagacgaACCCCTGAGATACTAATCCCGTCCTAATAGAGCTTTTGCTATCGTAaagatgggaaaagtacacaagTCACAAAAGTCAaatactaattatcttaattaatcatgggtgtggttaattttgggcataatgtgaaataaaccaatcagagtgtctcttgctcatcattcccttgcccttgcctggctagcactgctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87306 True 562 lncRNA 0.42 2 17606894 17670417

Neighbor

gene id symbol gene type direction distance location
cep112 cep112 coding downstream 299818 17103295 ~ 17307076 (-)
LOC103042974 LOC108437161 coding downstream 510069 17045514 ~ 17096825 (-)
LOC103039070 NA coding downstream 661229 16895580 ~ 16945665 (-)
LOC111192875 LOC108437882 coding downstream 899819 16696081 ~ 16707075 (-)
LOC103027149 LOC103027149 coding downstream 946387 16654113 ~ 16660507 (-)
stk19 stk19,LOC106601743,LOC106601674 coding upstream 50712 17721129 ~ 17731699 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding upstream 112335 17782752 ~ 17797809 (-)
LOC111192966 NA coding upstream 136657 17807074 ~ 17817082 (-)
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding upstream 169762 17840179 ~ 17855162 (-)
hid1 hid1,LOC107710705,LOC107698779 coding upstream 214203 17884620 ~ 17920811 (-)
G64682 NA non-coding downstream 25302 17578797 ~ 17581592 (-)
G64632 NA non-coding downstream 433332 17172649 ~ 17173562 (-)
G64622 NA non-coding downstream 450847 17155606 ~ 17156047 (-)
G64619 NA non-coding downstream 461227 17145278 ~ 17145667 (-)
LOC111192963 NA non-coding downstream 564823 17039842 ~ 17042071 (-)
G64692 NA non-coding upstream 6685 17677102 ~ 17678665 (-)
G64835 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 non-coding upstream 19812 17690229 ~ 17719911 (-)
G64841 rac1b,rac1,LOC103481976,LOC106531821,LOC102217008,LOC105935606 non-coding upstream 37579 17707996 ~ 17715442 (-)
G64857 NA non-coding upstream 98830 17769247 ~ 17815728 (-)
G64867 NA non-coding upstream 140759 17811176 ~ 17953544 (-)
G64492 NA other downstream 718991 16882335 ~ 16887903 (-)
G64387 NA other downstream 1021247 16585065 ~ 16585647 (-)
LOC103027187 NA other downstream 1739099 15671306 ~ 15867795 (-)
G64060 NA other downstream 2612062 14994164 ~ 14994832 (-)
LOC111192906 NA other downstream 2614164 14990229 ~ 14992730 (-)
LOC103043390 NA other upstream 8397 17678814 ~ 17689312 (-)
G64886 NA other upstream 258090 17928507 ~ 17931170 (-)
LOC111192976 NA other upstream 954458 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 967890 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 1227768 18898185 ~ 19023658 (-)

Expression


Co-expression Network