G64760


Basic Information

Item Value
gene id G64760
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17999375 ~ 18000064 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87425
tgcaataaTATATAACTGTTTATCACAGTATTAAAAAGAGAGGACAGATTATTCACTATTGGTTTTAAATGATCTTTAATTTTACAggatttagttttaattttagatttagTTCTCATTCTCAGAGAcgtctctggaaaaaattacagCACATTTAGTTTATGGATCAATAACATATAAGGATTTTTAACAGGCcaactaaagccctatccagatggtATTAGTTTCTTttatgtacatgtttttctcaggctgaattatctactgtttttctctgaactccgtgctcctccggtaattttagtcccgtccggacgcacatctctgagtttcgtctcctcgcctttaataaaatagatatttgtccactgccgcgcaccgtaattacactttggacgcgccacggtttccagcgagtggaaatggaggagctactgaacgccgcaaagatgtcatgtgaccgagaaaaaaaagcctaaagcctattctcctaacacctctaacatacTAAGTTGTTCccctcttttccttttttatctcACTTCATTTCCCTTCTGCCTTCTTCATGCCTTgtctaaattatgttttttccttgAATTTTTATGTCCtttattgctaaatgtacataattatttgtaagtcgctttggataaaatcACCCGCTAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87425 True 668 lncRNA 0.36 2 17999375 18000064

Neighbor

gene id symbol gene type direction distance location
LOC111192979 NA coding upstream 69526 17924346 ~ 17929849 (+)
otop2 otop2 coding upstream 120103 17860217 ~ 17879272 (+)
amn NA coding upstream 193549 17804284 ~ 17805826 (+)
LOC111192968 NA coding upstream 218783 17768928 ~ 17780592 (+)
LOC111192970 LOC108437139 coding upstream 235254 17748628 ~ 17764121 (+)
LOC103030006 LOC108437142,LOC105936201,LOC103140951,LOC107083146,LOC103468841,LOC102223636,LOC105899306,LOC105012845 coding downstream 161008 18161072 ~ 18172237 (+)
LOC107197388 NA coding downstream 176163 18176227 ~ 18193170 (+)
LOC111192978 NA coding downstream 196691 18196755 ~ 18213076 (+)
LOC111192973 NA coding downstream 215628 18215692 ~ 18251351 (+)
LOC103027278 NA coding downstream 631348 18631412 ~ 18634243 (+)
G64710 NA non-coding upstream 183647 17769247 ~ 17815728 (+)
G64709 NA non-coding upstream 183726 17780682 ~ 17815649 (+)
G64595 NA non-coding upstream 320933 17677928 ~ 17678442 (+)
G64586 NA non-coding upstream 325214 17622861 ~ 17674161 (+)
G64579 NA non-coding upstream 376703 17565712 ~ 17622672 (+)
G64763 NA non-coding downstream 7090 18007154 ~ 18008138 (+)
G64764 NA non-coding downstream 12417 18012481 ~ 18348193 (+)
G64766 NA non-coding downstream 28022 18028086 ~ 18028755 (+)
G64770 NA non-coding downstream 49985 18050049 ~ 18051243 (+)
G64776 NA non-coding downstream 114910 18114974 ~ 18123899 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other upstream 279463 17690209 ~ 17719912 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other upstream 1111180 16833290 ~ 16888195 (+)
G64449 NA other upstream 1123434 16873087 ~ 16875941 (+)
G64431 NA other upstream 1245815 16753043 ~ 16753560 (+)
G64289 NA other upstream 1556926 16439220 ~ 16442449 (+)
G64990 si:dkey-282h22.5,LOC108261121 other downstream 556064 18556128 ~ 18623499 (+)
LOC103045528 NA other downstream 1223145 19223209 ~ 19278071 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other downstream 1276738 19276802 ~ 19279517 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other downstream 1280228 19280292 ~ 19340879 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other downstream 1780599 19780663 ~ 19794325 (+)

Expression


Co-expression Network