G64886


Basic Information

Item Value
gene id G64886
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17928507 ~ 17931170 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87588
tctTTAAAATGCAAATTCAAGCTGCAGCCTTCCAGAGGGTCCGGCTGGTCGGCTGCGTTGAGTAAATGAGTGCAGGAGAAATGAAAAGAATGGGGTGAAATAACCTGAACACATTTAAATCAATCAGTGCTTTCTCGTAAAGGTTCACACTACGCGACTTCGCACTACGCAGAATCgtttaaatcctttaatcttaaagccatcagctgccagagccctgagagagcacaattgtagagccttgctctctctccctctctcactttgGGTGGgtgcagtacagtagatggcgctcttctttcccctactcatcactcctagggtgacgtggatcaacacaaggctgcgtctgtgagctgatgtatcagaaccgagtcgctgcgttgtcctctgagcgttagcgctgtgatgctactctgcaaaaagtttaaaaagaggcggagtctgacttaacatgtattggaggaggcgtgtgctggtcttccttaccctcctagtgttggagcatcactagtgatagggagagtcaTAATAAGAGTGGGCTGGGTAATTGTCGTCCTGTCGTCTGGGGAACGTGGTCGGGCTTCCGGCAGAGCGAAGGCGTCGTCGTTTTCATGCACCACAGATGAGAAGAAATGTCCCTGAACGTCCCAGAAAGCCAGCAGATCACCTGTCCCGGGACTGTCCTCTTTTCTGCAGGCTCTGGAAGTGCGCCTCTCTCAGGACCTGGTTGATATGTTGGTACGAGCCCAGGCCGCTGGGGCCGGTCTGGTCCGAGGAGCTGAGGGGACTGCAGGGCCCGAGGGTGGcgagggttgccagattgtcaGCTCCATACtggctgctggtgctgctgctgctcccagctGCATGCTCCGGACTACTGACCCCACTGCTGTCACAGCTGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87588 True 909 TUCP 0.53 2 17928507 17931170

Neighbor

gene id symbol gene type direction distance location
hid1 hid1,LOC107710705,LOC107698779 coding downstream 7696 17884620 ~ 17920811 (-)
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding downstream 73345 17840179 ~ 17855162 (-)
LOC111192966 NA coding downstream 111425 17807074 ~ 17817082 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding downstream 130698 17782752 ~ 17797809 (-)
stk19 stk19,LOC106601743,LOC106601674 coding downstream 196808 17721129 ~ 17731699 (-)
LOC103047157 socs3,LOC103047157,LOC107552116,LOC107671257,LOC107698761 coding upstream 422163 18353333 ~ 18356495 (-)
LOC103034879 usp36,LOC107717487 coding upstream 558482 18489652 ~ 18536743 (-)
LOC103028836 NA coding upstream 607733 18538903 ~ 18550973 (-)
LOC103028209 NA coding upstream 636507 18567677 ~ 18575169 (-)
tspan10 NA coding upstream 655399 18586569 ~ 18590070 (-)
G64882 NA non-coding downstream 46087 17880450 ~ 17882420 (-)
G64857 NA non-coding downstream 112779 17769247 ~ 17815728 (-)
G64835 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 non-coding downstream 208596 17690229 ~ 17719911 (-)
G64841 rac1b,rac1,LOC103481976,LOC106531821,LOC102217008,LOC105935606 non-coding downstream 213065 17707996 ~ 17715442 (-)
G64692 NA non-coding downstream 249842 17677102 ~ 17678665 (-)
G64898 NA non-coding upstream 46377 17977547 ~ 17978089 (-)
G64902 NA non-coding upstream 68386 17999556 ~ 17999808 (-)
G64904 NA non-coding upstream 92904 18024074 ~ 18024657 (-)
G64926 NA non-coding upstream 241362 18172532 ~ 18173990 (-)
G64936 NA non-coding upstream 267893 18199063 ~ 18230483 (-)
LOC103043390 NA other downstream 239195 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 263946 17535296 ~ 17664561 (-)
G64492 NA other downstream 1040604 16882335 ~ 16887903 (-)
G64387 NA other downstream 1342860 16585065 ~ 16585647 (-)
LOC103027187 NA other downstream 2060712 15671306 ~ 15867795 (-)
LOC111192976 NA other upstream 693705 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 707137 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 967015 18898185 ~ 19023658 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 1349132 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 1374817 19305987 ~ 19370708 (-)

Expression


Co-expression Network