G64898


Basic Information

Item Value
gene id G64898
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 17977547 ~ 17978089 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87601
GCAACCCACAcggataccacatcaacccacacagataccacagcaacccacacagataccacagcaacccacacagataccacagcaacccacacagataccacagcaacccacaaagataccacagcaacccacacagataccacatcaacccacacagataccacagcaacccacacggataccacatcaacccacacagataccacagcaacccacacagataccac
>TU87602
GCAACCCACAcggataccacatcaacccacacagataccacagcaacccacacagataccacagcaacccacacagataccacagcaacccacacagataccacagcaacccacaaagataccacagcaacccacacggataccacatcaacccacacagataccacagcaacccacacagataccacaagcaacccacacagatacacagcaaCCCACAAGATACCACaggcaacccacacagataccacatcaacccacacagataccacagcaacccacacggataccaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87601 False 230 lncRNA 0.52 2 17977547 17978089
TU87602 True 294 lncRNA 0.52 2 17977755 17978089

Neighbor

gene id symbol gene type direction distance location
hid1 hid1,LOC107710705,LOC107698779 coding downstream 56736 17884620 ~ 17920811 (-)
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding downstream 122385 17840179 ~ 17855162 (-)
LOC111192966 NA coding downstream 160465 17807074 ~ 17817082 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding downstream 179738 17782752 ~ 17797809 (-)
stk19 stk19,LOC106601743,LOC106601674 coding downstream 245848 17721129 ~ 17731699 (-)
LOC103047157 socs3,LOC103047157,LOC107552116,LOC107671257,LOC107698761 coding upstream 375244 18353333 ~ 18356495 (-)
LOC103034879 usp36,LOC107717487 coding upstream 511563 18489652 ~ 18536743 (-)
LOC103028836 NA coding upstream 560814 18538903 ~ 18550973 (-)
LOC103028209 NA coding upstream 589588 18567677 ~ 18575169 (-)
tspan10 NA coding upstream 608480 18586569 ~ 18590070 (-)
G64867 NA non-coding downstream 24003 17811176 ~ 17953544 (-)
G64882 NA non-coding downstream 95127 17880450 ~ 17882420 (-)
G64857 NA non-coding downstream 161819 17769247 ~ 17815728 (-)
G64835 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 non-coding downstream 257636 17690229 ~ 17719911 (-)
G64841 rac1b,rac1,LOC103481976,LOC106531821,LOC102217008,LOC105935606 non-coding downstream 262105 17707996 ~ 17715442 (-)
G64902 NA non-coding upstream 21467 17999556 ~ 17999808 (-)
G64904 NA non-coding upstream 45985 18024074 ~ 18024657 (-)
G64926 NA non-coding upstream 194443 18172532 ~ 18173990 (-)
G64936 NA non-coding upstream 220974 18199063 ~ 18230483 (-)
G64938 NA non-coding upstream 225055 18203144 ~ 18222192 (-)
G64886 NA other downstream 46377 17928507 ~ 17931170 (-)
LOC103043390 NA other downstream 288235 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 312986 17535296 ~ 17664561 (-)
G64492 NA other downstream 1089644 16882335 ~ 16887903 (-)
G64387 NA other downstream 1391900 16585065 ~ 16585647 (-)
LOC111192976 NA other upstream 646786 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 660218 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 920096 18898185 ~ 19023658 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 1302213 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 1327898 19305987 ~ 19370708 (-)

Expression


Co-expression Network