G64926


Basic Information

Item Value
gene id G64926
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 18172532 ~ 18173990 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87632
CTGAAATGAGAATTTTAATTAAAGAGAATTAAGAAAGAGTTAAATACAGAATGTGTGATTTGAATTTGGTTTCAAGCGTTCACTCCAGAAACACAGAAAGTCCAGGACACCCCATGATGCTAATGTTAACAAcaggtacagtacaggccaaaagtttggacacaccttctctttttcagtttgtttctttattttcatgattatttacattgtagattctccctgaagcatcaaaactatgaatgaacacatgtggagttttatgtacttaataaaaaatgagctgaacctccacagtcaccggacctgaacccaatccagatggtttggggtgagctggagcacagagtgaagaagacaaaggagcaacaagtgctaataaacacctctgggaactccttccttccttcaagactgttggagaacttttcatttcaggtggccacctcttaaatgaagctcattgagagaatgatgccaagtgtgtgtaaagcagtaatcagagcaaagagtggcttttattttgaagaaactagaatataaaacatgttttttttgttatttacctttttttgttaagtaaataaaactccacatgtgttcattcatagttttgatgcttcattgagaatctacaatgtaaaagaaaaaagagaaagtgtgtccaaacctttggcctgtactgtacatctctacctttagtgagtgttgagctggtacagtgatgcggatcagatgcagcagtgctgctggagtttttaaacacctcagtgtctctGCTGCACTGAGAATAGTGCACCAGCAGCGTCCTGTCGGCGGTGTCCTTtgggtagtgtcctgtgggcagcctgCTTTAGGTAGCATCCTGCTGGAGGTGTCTTGTTTGTACAGTCCTGTGGGAGGTTTCTTTTTGGCAGTATCCTTCAgaaacagtgtttaaacactccagcagcactgctgcagctgAATCTGAACCCCAGTCTGTGATTGGAGAACTATAAAGTGTCCTGTACACTCAGTGCAGCGCATATAGTATATAGTGAAAAGTGTGTATAGAAACGATGGAAGATCAATATTAGAGTGTATcaatattacatgttttgtATTCAGTTTTGTAAAGCATAAATATTGTggaaatattaaattaacattatcAATATcctaactaataataatataactgcTAGAATTATAGTCATGAGATGAGAGATAACAATATGtaacatctcaaaaaaaaaaaacttgacaaaTTAAACATGACAGCAGTGCATCAGATGTTCAAAACTCATATATCGtacacagctctgtaaaaaaatgaagagataacttcagtttctgaatcagtttctctgattttgctatttataggtttatgtttgagtaaaatgaacattgttgttttattctataaactacagacaacatt

Function

GO:

id name namespace
GO:0015250 water channel activity molecular_function
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function
GO:0005372 water transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87632 True 1426 lncRNA 0.37 2 18172532 18173990

Neighbor

gene id symbol gene type direction distance location
hid1 hid1,LOC107710705,LOC107698779 coding downstream 251721 17884620 ~ 17920811 (-)
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding downstream 317370 17840179 ~ 17855162 (-)
LOC111192966 NA coding downstream 355450 17807074 ~ 17817082 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding downstream 374723 17782752 ~ 17797809 (-)
stk19 stk19,LOC106601743,LOC106601674 coding downstream 440833 17721129 ~ 17731699 (-)
LOC103047157 socs3,LOC103047157,LOC107552116,LOC107671257,LOC107698761 coding upstream 179343 18353333 ~ 18356495 (-)
LOC103034879 usp36,LOC107717487 coding upstream 315662 18489652 ~ 18536743 (-)
LOC103028836 NA coding upstream 364913 18538903 ~ 18550973 (-)
LOC103028209 NA coding upstream 393687 18567677 ~ 18575169 (-)
tspan10 NA coding upstream 412579 18586569 ~ 18590070 (-)
G64904 NA non-coding downstream 147875 18024074 ~ 18024657 (-)
G64902 NA non-coding downstream 172724 17999556 ~ 17999808 (-)
G64898 NA non-coding downstream 194443 17977547 ~ 17978089 (-)
G64867 NA non-coding downstream 218988 17811176 ~ 17953544 (-)
G64882 NA non-coding downstream 290112 17880450 ~ 17882420 (-)
G64936 NA non-coding upstream 25073 18199063 ~ 18230483 (-)
G64938 NA non-coding upstream 29154 18203144 ~ 18222192 (-)
G64948 NA non-coding upstream 153731 18327721 ~ 18328460 (-)
G64959 NA non-coding upstream 270636 18444626 ~ 18445767 (-)
G65067 NA non-coding upstream 386138 18560128 ~ 18560548 (-)
G64886 NA other downstream 241362 17928507 ~ 17931170 (-)
LOC103043390 NA other downstream 483220 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 507971 17535296 ~ 17664561 (-)
G64492 NA other downstream 1284629 16882335 ~ 16887903 (-)
G64387 NA other downstream 1586885 16585065 ~ 16585647 (-)
LOC111192976 NA other upstream 450885 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 464317 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 724195 18898185 ~ 19023658 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 1106312 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 1131997 19305987 ~ 19370708 (-)

Expression


Co-expression Network