G64959


Basic Information

Item Value
gene id G64959
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 18444626 ~ 18445767 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87675
TCAGTGTACCTGGCACTATAGCATCAGTGTACCTGGCTCTGTGTATCCAGCATTGTAGCATCTGTGTACCTGGCACTATGGCAGCACTGTACCCGGCACTGTGTACCCAGAACTATAGCATCAGTGTACCTGGCACAGTGTACCCGGCACTGTATACCCACTATGGCTGGAGTTTACCCGGCACTGTTTACCTGGCACTGTATACCTAGCACTGTTTATGCGGCACTGTGTACCTGGCATTGTGTATCCGGCCCAGTGTATCCAGCTTTATAGCATCAGTGTACCTGGCACTGTACACCCAGCACTTTGTGCCTGGCACTGTGTATCTGGCACTGTATACTTAGCCCTGTGTACTCAGCCGCGTACACCCAGCGCTACAGCAGTAGTTTACCTGGCACTTTATAATTAGCACTGTTTATGTGTACCTGGCACTGTATACCCGATGCTATAGCATCAGTGTACCCGGCACTGTGTACCACTGTGTACCTAGCACTATGGCACTGTGTACCTGCCACTGCTCTCAGCTGCAGTCATTTTTCCCAGCCACCATTTAACACTGATTTAATGTATTTCCCTGATGTGAAAGGAACAAAACCACAGCAAAGTTTCCATGAATATAATTTGCCTATTATttgcacacagagactgaaagcaGCCAAAACAATATGCTGGGTTGGTCACACCCGCTGTTTCAAATTCCTGGATGTAGGGCTGTCACAATCATGAACTTTTAGCCGACAAATAAATTCCTATACAAATAATTACGATTAACAATTCAATTATTTGTTTTCATTCTCATTATTTTAGCAAACCATGACTGTTTAATAATACTGAAATAATGACCACATACGGTTATGATGAagtattttgttgtgttttgctATTTTGATTTGGCTAAATTAAGAAGTCCAAAAGTCTGAATTTAGCGTATTCTTCGTAACTAAACAATTAATAGAAGACCATACTGAATAAAGCTCTGCTGTAAAGAGAGGCCAGAGCTTGAAATCAACAATCTTTAATATCTGATCACTAGATCTGGATCCTAACCATTCTGAATTCACGATTAAAATATAAggagattgtttttatttcttaagtgtGTAAACACTGGAAAATGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87675 True 1119 lncRNA 0.42 2 18444626 18445767

Neighbor

gene id symbol gene type direction distance location
LOC103047157 socs3,LOC103047157,LOC107552116,LOC107671257,LOC107698761 coding downstream 88131 18353333 ~ 18356495 (-)
hid1 hid1,LOC107710705,LOC107698779 coding downstream 523815 17884620 ~ 17920811 (-)
ush1g ush1g,ush1ga,LOC107556601,LOC107698769,LOC107568596 coding downstream 589464 17840179 ~ 17855162 (-)
LOC111192966 NA coding downstream 627544 17807074 ~ 17817082 (-)
LOC111192974 tvp23b,LOC108437154,LOC105899270 coding downstream 646817 17782752 ~ 17797809 (-)
LOC103034879 usp36,LOC107717487 coding upstream 43885 18489652 ~ 18536743 (-)
LOC103028836 NA coding upstream 93136 18538903 ~ 18550973 (-)
LOC103028209 NA coding upstream 121910 18567677 ~ 18575169 (-)
tspan10 NA coding upstream 140802 18586569 ~ 18590070 (-)
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding upstream 271735 18717502 ~ 18718630 (-)
G64948 NA non-coding downstream 116166 18327721 ~ 18328460 (-)
G64936 NA non-coding downstream 214143 18199063 ~ 18230483 (-)
G64938 NA non-coding downstream 222434 18203144 ~ 18222192 (-)
G64926 NA non-coding downstream 270636 18172532 ~ 18173990 (-)
G64904 NA non-coding downstream 419969 18024074 ~ 18024657 (-)
G65067 NA non-coding upstream 114361 18560128 ~ 18560548 (-)
G65069 NA non-coding upstream 135841 18581608 ~ 18582016 (-)
G65066 NA non-coding upstream 173944 18619711 ~ 18623603 (-)
G65064 NA non-coding upstream 259373 18705140 ~ 18709436 (-)
G65096 NA non-coding upstream 265813 18711580 ~ 18753784 (-)
G64886 NA other downstream 513456 17928507 ~ 17931170 (-)
LOC103043390 NA other downstream 755314 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 780065 17535296 ~ 17664561 (-)
G64492 NA other downstream 1556723 16882335 ~ 16887903 (-)
G64387 NA other downstream 1858979 16585065 ~ 16585647 (-)
LOC111192976 NA other upstream 179108 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 192540 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 452418 18898185 ~ 19023658 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 834535 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 860220 19305987 ~ 19370708 (-)

Expression


Co-expression Network