G65011


Basic Information

Item Value
gene id G65011
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 18654778 ~ 18734150 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87738
gtcctctgtgattttattcccgtccagaacgatcatgtaggtgtttttctcagacgtcctctgagaaaattacaggctgaattatctactgtttttctctgaactccgtgctcctccggtaattttagtcccgtccggacgcacatctctgagtttcgtctcctcgcctttaataaaatagatatttgtccactgccgcgcaccgtaattacactttggacgtgccacggtttccacggagatccacgttaaaaacacaacagcgagtggaaatggaggagctactgaacactgtgatgatgtcacgtgaccgagaaaaaaaagcctaaaaactcactgatcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87738 True 344 lncRNA 0.45 2 18654778 18734150

Neighbor

gene id symbol gene type direction distance location
LOC111192977 NA coding upstream 89 18652128 ~ 18654689 (+)
LOC103027278 NA coding upstream 20535 18631412 ~ 18634243 (+)
LOC111192973 NA coding upstream 403427 18215692 ~ 18251351 (+)
LOC111192978 NA coding upstream 441702 18196755 ~ 18213076 (+)
LOC107197388 NA coding upstream 461608 18176227 ~ 18193170 (+)
LOC111192965 LOC108435873 coding downstream 256367 18990517 ~ 19019268 (+)
LOC111192912 NA coding downstream 442852 19177002 ~ 19178587 (+)
LOC103043906 LOC108435857,LOC107654574,LOC107748880,LOC107558871,LOC108279187,LOC107087444 coding downstream 534272 19268422 ~ 19271847 (+)
arhgdia arhgdia,LOC107654583,LOC107665665 coding downstream 552685 19286835 ~ 19305457 (+)
cd36 NA coding downstream 634364 19368514 ~ 19399220 (+)
G64980 NA non-coding upstream 38620 18536667 ~ 18616158 (+)
G64991 NA non-coding upstream 85288 18567027 ~ 18569490 (+)
G64834 NA non-coding upstream 149051 18504951 ~ 18505727 (+)
G64803 NA non-coding upstream 215922 18362837 ~ 18438856 (+)
G65044 NA non-coding downstream 58032 18792182 ~ 18840564 (+)
G65053 NA non-coding downstream 99809 18833959 ~ 18834854 (+)
G65116 NA non-coding downstream 167302 18901452 ~ 18908686 (+)
G65122 NA non-coding downstream 211176 18945326 ~ 19032751 (+)
G65144 NA non-coding downstream 428419 19162569 ~ 19162918 (+)
G64990 si:dkey-282h22.5,LOC108261121 other upstream 31279 18556128 ~ 18623499 (+)
G64698 rac1,RAC1,LOC105898786,LOC108437155,LOC106601744,LOC107664344 other upstream 934866 17690209 ~ 17719912 (+)
LOC103030423 pcyt2,LOC108437168,LOC108277112,LOC107701914,LOC105013038,LOC107576708,LOC107729574,LOC106601930 other upstream 1766583 16833290 ~ 16888195 (+)
G64449 NA other upstream 1778837 16873087 ~ 16875941 (+)
G64431 NA other upstream 1901218 16753043 ~ 16753560 (+)
LOC103045528 NA other downstream 489059 19223209 ~ 19278071 (+)
LOC103044219 mcrip1,fam195b,LOC107654575 other downstream 542652 19276802 ~ 19279517 (+)
alyref alyref,LOC107743018,LOC107665635,LOC107748861 other downstream 546142 19280292 ~ 19340879 (+)
LOC103037311 LOC103037311,LOC103358095,LOC106514816,LOC107386321 other downstream 1046513 19780663 ~ 19794325 (+)
G65565 NA other downstream 2222985 20957135 ~ 20957635 (+)

Expression


Co-expression Network