G65066


Basic Information

Item Value
gene id G65066
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 18619711 ~ 18623603 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU87823
tttagaaaaacagacagaaatggATGATAAACTGTATGGTTATTTGTTTGAATGGCTCAGTTAGGGATGCATcaaaaaatgtacatatttggacaaaatcaaaatcaatcaaaaccaaactaaataaagcatttCGTCTTTCATAattttgctgctttttctctattttaaaaaaatgaaatagcataaatatacatttctcttgctttttaactaaactattttattttatgtttaatataaaaactgaACTAATACAGAATCAATACAGAACTCAGTATATCTCAGTATCAGCGTTtggtataaattattttgtGCTTTAACTTCATCCAAACACGCTTTATCCAAAAAATGCTTATATTTGCAAATAATTTTAGTTGGCCCGTATTCGATGCATCcctaataatgataataatgtaattataatgaataatgttatattatattataatttctttATTATATCCTCATATAAAAGCTGAATAGTTGATATCAGATGGTAGTTCAGTAGTCCGTTAGGTGCCGGGGCCTCTCCGGGCCCTCGCCCGCCGGACCCACTGTCCGGTATGAGCGGATCTGGCGGGGGTTCTGGCGGGGGGTCTGGCGGGGGTTCTGGCGGGGGTTCTGGGGGGCGGGCGCTGGGGGGCGACCCGTAAGGAGGATTTGGGGAGTTTTCCAGCCTGCAGTTCGTCCACGAAGCTCTCCACCCGGTCGAACTTACTGGAGAGTTTAGCCAAATTCTCCTTCAGAGAGTCGAACTGCTTATACAGATCTCCCACTGCGTCCGACAGCGGCTGGATCCTGCACATACTCAGGTAGGACAGAAGCGTGATCGTTCACTAGCATGTCCTTCACCTGGTGCATTATAGCGTATTTCCAGTTATCCAGAACCTGCGTCAGATTAGAGCACCTTTTACCTGCTGATTtatctgtaataaataaaaacagaaaccgGTGGATTTACTGCTCAAACTAACAGAGTTTATCCAAACTTATCTGAGCTTACAGCGTTCCAGTAAAACATTCAGATATCAGATttcactgttagcattgtcccaggttagcactgttagcgaTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87823 True 1080 lncRNA 0.40 2 18619711 18623603

Neighbor

gene id symbol gene type direction distance location
tspan10 NA coding downstream 29641 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 44542 18567677 ~ 18575169 (-)
LOC103028836 NA coding downstream 68738 18538903 ~ 18550973 (-)
LOC103034879 usp36,LOC107717487 coding downstream 82968 18489652 ~ 18536743 (-)
LOC103047157 socs3,LOC103047157,LOC107552116,LOC107671257,LOC107698761 coding downstream 263216 18353333 ~ 18356495 (-)
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding upstream 93899 18717502 ~ 18718630 (-)
LOC103035518 nptx1l,LOC108435874 coding upstream 487530 19111133 ~ 19121460 (-)
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding upstream 785695 19409298 ~ 19515383 (-)
lhfpl3 lhfpl3 coding upstream 1041956 19665559 ~ 19714443 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 1109152 19732755 ~ 19738419 (-)
G65069 NA non-coding downstream 37695 18581608 ~ 18582016 (-)
G65067 NA non-coding downstream 59163 18560128 ~ 18560548 (-)
G64959 NA non-coding downstream 173944 18444626 ~ 18445767 (-)
G64948 NA non-coding downstream 291251 18327721 ~ 18328460 (-)
G64936 NA non-coding downstream 389228 18199063 ~ 18230483 (-)
G65064 NA non-coding upstream 81537 18705140 ~ 18709436 (-)
G65096 NA non-coding upstream 87977 18711580 ~ 18753784 (-)
G65102 NA non-coding upstream 136197 18759800 ~ 18760297 (-)
G65103 NA non-coding upstream 136768 18760371 ~ 18816516 (-)
G65108 NA non-coding upstream 158268 18781871 ~ 18836432 (-)
G64886 NA other downstream 688541 17928507 ~ 17931170 (-)
LOC103043390 NA other downstream 930399 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 955150 17535296 ~ 17664561 (-)
G64492 NA other downstream 1731808 16882335 ~ 16887903 (-)
G64387 NA other downstream 2034064 16585065 ~ 16585647 (-)
LOC111192976 NA other upstream 1272 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other upstream 14704 18638307 ~ 18650343 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other upstream 274582 18898185 ~ 19023658 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 656699 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 682384 19305987 ~ 19370708 (-)

Expression


Co-expression Network