G65184 (LOC108435872,LOC108274344,LOC107731677,LOC107558868)


Basic Information

Item Value
gene id G65184
gene name LOC108435872,LOC108274344,LOC107731677,LOC107558868
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 18898185 ~ 19023658 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88001
AGCACTCGTTTTTAATCTCAGATTACAAGCCAAACATTGGAGTCATGTGGCAACAATGGAGGTCTAGAGGAAGCTGTTTCttcaagactctgagaaaagAACCACAGTTTGAGAAACTCTAAGTTTAAAGTTCAGTTGATTGGTGGGCTGGAGTCTCGTGGAGTGCTGAGGAAGATCAGTGATATGCTGGAGATCATCCTGAAGAGAATCGACGCTCTCGCCAAACTCAGCAACAGCACTAATAGCCACAGGTTGGAGGAGCTTAGCTCTGCTCtcgacagGTTTCAGCCGGTGGGTCTGGTGGAGAGGATTCAGGCGATTGCTCAGAATGTGTCGGAGATGGCGGTGCGGGTGGAGCAGATCCTACAGAAGAGGAGAGACGGGACTGCAGGACAGTGCGAAGTCCCGAAGGACCCCGGGTACCCGGACTGTGCCAGTAAAATTGATTGGATGAGAGCCAGGTGGACGTCGGACCCCTGCTACGCTTATTATGGGGTGGATGGATCCGACTGCTCCTTCCTCATCTACCTGAGTGAGGTGGAGTGGTTCTGCCCCCCACTGGCCTGGAGGAACCACAGCATCCTGACGGCAGGAAACAGCACACCTAAGAGACAGGCGGTGGTGCGCTCAGACCTGGGGCCGCTGCTGGAGCAGGTGGGTTCGGGGAAAGAGTCTCTGAGCTTCATGAGGAGGAGAATACGGCGGCTGGCGGTGCAGTGGGCCGTCGCTGCCCGAAGACTGAACCAGCGTCTGCACAACAAACAGAGGCAGGAGAAGAGGgtcttGGTTCATGTGGGGTTTCTAACAGAGGAGTCTGGTGATGTGTTCAGTCCTAAAGTGCTGAAGGGAGGACCGCTGGGGGAGATTGG
>TU88002
cacacacacacacacacacacactatacacacacacacactatacacacacaatacacacacacacacacacacacacacaccctattTTCCTCCAGTTAACACGAATGGCCATCCCATTATGTGTGACGTCACAGCAGTGGGATATTTAGTCTGCGAGCCCGTCAGCTCAGACTGTACACGCGCGGAGCCGGAGCGGAGGGGAGCTGTCCGCGGTGCGGTGCTGAACCCCCGAGAACCGGGAGCTGTCCGCGGTGCTGAAGCTGAGAGCCGGGCACTGAAGCCGAGAAGCGGGCGCTCTCCGCGGTGCTGAACCTCCGAGAAGCGGGCGCTCTCCGCGGTGCTGAACCTCCGAGAAGCGGGCGCTGTCCGCGGTGCTGAAGCTCCGAGAAGCGGGCGCTGTCCGCGGTGCTGAAGCTGAGCGCTGTCCGCGGTGCTGAAGCTGAAAGCCGGGAGCGGTGGTGATGCTGAGCGCTGTCCGCGGTGCTGAAATCCGGCGCTGCTATCCTTCTGATTAAGTGCTGATTGAATGGGAACAACTGATGGCGCTGTGTTCCTGACATTTCCCAGCCTTTAGCATCTCCTCTCTGCACAGAGACCACCTGAGAGCTCAGTACCTTTCAGGAGGATTTCCCCTTAATCCATCACTCCAACACAACAACTTCAATCCCTTCAATCTTTTAGCTCAGTTTTTCGCTTCTCCTGCGGATGTTATACGACTTTTCGTAAGATGACTTCTGAAGCACTTTCCCTCGAACACTCAGCGGAGTTGTGCTTAATTTAAGCTTGTGCCGAATACATCATTACTGTGCTGCCTTATATACAGACTCTCTGGATAAAGAACGATGCTGCTGACAGATCGCATAACGTGACCTCacgttatataaatatatacatatatacatagatcaCCTGCGTGAAAATGGTGATCACTCTGAACAGCGATGGCATGGCGATGGTGAGGAGATGCCTCCTGACGTTCAAGCCCttcagGATTTTCGTGGCGGGGATCGGATTCTTCAGCCTCTGCTTCTTAATGACCTCTCTGGGGGGGCAGTTCTCGGCCAAGCGGCTCGGGGACTCACCCTTCACCATCCGGACTGAAGTGATTGGTGGGCTGGAGTCTCGTGGAGTGCTGAGGAAGATCAGTGATATGCTGGAGATCATCCTGAAGAGAATCGACGCTCTCGCCAAACTCAGCAACAGCACTAATAGCCACAGGTTGGAGGAGCTTAGCTCTGCTCtcgacagGTTTCAGCCGGTGGGTCTGGTGGAGAGGATTCAGGCGATTGCTCAGAATGTGTCGGAGATGGCGGTGCGGGTGGAGCAGATCCTACAGAAGAGGAGAGACGGGACTGCAGGACAGTGCGAAGTCCCGAAGGACCCCGGGTACCCGGACTGTGCCAGTAAAATTGATTGGATGAGAGCCAGGTGGACGTCGGACCCCTGCTACGCTTATTATGGGGTGGATGGATCCGACTGCTCCTTCCTCATCTACCTGAGTGAGGTGGAGTGGTTCTGCCCCCCACTGGCCTGGAGGAACCACAGCATCCTGACGGCAGGAAACAGCACACCTAAGAGACAGGCGGTGGTGCGCTCAGACCTGGGGCCGCTGCTGGAGCAGGTGGGTTCGGGGAAAGAGTCTCTGAGCTTCATGAGGAGGAGAATACGGCGGCTGGCGGTGCAGTGGGCCGTCGCTGCCCGAAGACTGAACCAGCGTCTGCACAACAAACAGAGGCAGGAGAAGAGGgtcttGGTTCATGTGGGGTTTCTAACAGAGGAGTCTGGTGATGTGTTCAGTCCTAAAGTGCTGAAGGGAGGACCGCTGGGGGAGATTGG

Function

NR:

description
PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88001 False 869 TUCP 0.55 7 18898185 18919522
TU88002 True 1838 TUCP 0.55 10 18898185 19023658

Neighbor

gene id symbol gene type direction distance location
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding downstream 179555 18717502 ~ 18718630 (-)
tspan10 NA coding downstream 308115 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 323016 18567677 ~ 18575169 (-)
LOC103028836 NA coding downstream 347212 18538903 ~ 18550973 (-)
LOC103034879 usp36,LOC107717487 coding downstream 361442 18489652 ~ 18536743 (-)
LOC103035518 nptx1l,LOC108435874 coding upstream 87475 19111133 ~ 19121460 (-)
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding upstream 385640 19409298 ~ 19515383 (-)
lhfpl3 lhfpl3 coding upstream 641901 19665559 ~ 19714443 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 709097 19732755 ~ 19738419 (-)
acss3 acss3,LOC107755903,LOC107749070 coding upstream 1030293 20053951 ~ 20064790 (-)
G65108 NA non-coding downstream 61753 18781871 ~ 18836432 (-)
G65111 NA non-coding downstream 62749 18833847 ~ 18835436 (-)
G65103 NA non-coding downstream 81669 18760371 ~ 18816516 (-)
G65102 NA non-coding downstream 137888 18759800 ~ 18760297 (-)
G65096 NA non-coding downstream 144401 18711580 ~ 18753784 (-)
G65213 NA non-coding upstream 34790 19058448 ~ 19144110 (-)
G65222 NA non-coding upstream 115939 19139597 ~ 19248687 (-)
G65236 NA non-coding upstream 225528 19249186 ~ 19250162 (-)
G65232 NA non-coding upstream 279236 19302894 ~ 19305411 (-)
G65251 NA non-coding upstream 355056 19378714 ~ 19384419 (-)
LOC111192976 NA other downstream 185665 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other downstream 247842 18638307 ~ 18650343 (-)
G64886 NA other downstream 967015 17928507 ~ 17931170 (-)
LOC103043390 NA other downstream 1208873 17678814 ~ 17689312 (-)
LOC111192911 cyth3b,cyth3,LOC107556600,LOC106518738,LOC108239256,LOC107376516,LOC102303741,LOC108437157,LOC108258062 other downstream 1233624 17535296 ~ 17664561 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 256644 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 282329 19305987 ~ 19370708 (-)
ndufb2 ndufb2 other upstream 576556 19600214 ~ 19605725 (-)
llph llph other upstream 771496 19795154 ~ 19799602 (-)
ost4 NA other upstream 2521760 21545418 ~ 21574199 (-)

Expression


Co-expression Network