G65213


Basic Information

Item Value
gene id G65213
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 19058448 ~ 19144110 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU88035
aactgtggatgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaacataaaaccacggctgatcaaatcacgcagaattcaatgttcacctcaactctcctgtttccaccagaactgtccgtcaccacaatcaattactgtgctctaaaaccaggtgtttcagtttcattctccaacccctgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88035 True 211 lncRNA 0.45 2 19058448 19144110

Neighbor

gene id symbol gene type direction distance location
LOC103035404 zgc:153845,LOC103035404,LOC108435855,LOC104925609,LOC106601411 coding downstream 339818 18717502 ~ 18718630 (-)
tspan10 NA coding downstream 468378 18586569 ~ 18590070 (-)
LOC103028209 NA coding downstream 483279 18567677 ~ 18575169 (-)
LOC103028836 NA coding downstream 507475 18538903 ~ 18550973 (-)
LOC103034879 usp36,LOC107717487 coding downstream 521705 18489652 ~ 18536743 (-)
sema3c sema3c,LOC107680038,LOC107694195,LOC106576426 coding upstream 265188 19409298 ~ 19515383 (-)
lhfpl3 lhfpl3 coding upstream 521449 19665559 ~ 19714443 (-)
guca1a guca1a,LOC107590762,LOC107755893 coding upstream 588645 19732755 ~ 19738419 (-)
acss3 acss3,LOC107755903,LOC107749070 coding upstream 909841 20053951 ~ 20064790 (-)
myf5 myf5,LOC107734855 coding upstream 1038984 20183094 ~ 20189701 (-)
G65185 NA non-coding downstream 149754 18901627 ~ 18908694 (-)
G65108 NA non-coding downstream 222016 18781871 ~ 18836432 (-)
G65111 NA non-coding downstream 223012 18833847 ~ 18835436 (-)
G65103 NA non-coding downstream 241932 18760371 ~ 18816516 (-)
G65102 NA non-coding downstream 298151 18759800 ~ 18760297 (-)
G65236 NA non-coding upstream 105076 19249186 ~ 19250162 (-)
G65232 NA non-coding upstream 158784 19302894 ~ 19305411 (-)
G65251 NA non-coding upstream 234604 19378714 ~ 19384419 (-)
G65256 NA non-coding upstream 258234 19402344 ~ 19426200 (-)
G65267 NA non-coding upstream 366690 19510800 ~ 19574509 (-)
G65184 LOC108435872,LOC108274344,LOC107731677,LOC107558868 other downstream 34790 18898185 ~ 19023658 (-)
LOC111192976 NA other downstream 345928 18624875 ~ 18712520 (-)
LOC111192971 LOC108435850 other downstream 408105 18638307 ~ 18650343 (-)
G64886 NA other downstream 1127278 17928507 ~ 17931170 (-)
LOC103043390 NA other downstream 1369136 17678814 ~ 17689312 (-)
G65231 alyref,LOC107665635,LOC107748861,LOC107743018,LOC107654581 other upstream 136192 19280302 ~ 19284032 (-)
cdr2l cdr2l,LOC107665638,LOC107743016 other upstream 161877 19305987 ~ 19370708 (-)
ndufb2 ndufb2 other upstream 456104 19600214 ~ 19605725 (-)
llph llph other upstream 651044 19795154 ~ 19799602 (-)
ost4 NA other upstream 2401308 21545418 ~ 21574199 (-)

Expression


Co-expression Network